RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ERHP84090 104 aaKnown RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 LINC01620Q4KN68 170 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 TMEM97Q5BJF2 176 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 RPL7L1Q6DKI1 246 aaKnown RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 KCNRGQ8N5I3 272 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 SGMS2Q8NHU3 365 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 CIB3Q96Q77 187 aaPredicted RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 GINS3Q9BRX5 216 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 FNDC4Q9H6D8 234 aaPredicted RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 ZNF702PQ9H963 129 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 IGHV3-23P01764 117 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 IGHG2P01859 326 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 DEFA4P12838 97 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 RAB5AP20339 215 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 SULT1A1P50225 295 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 OR2F1Q13607 317 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 OPCMLQ14982 345 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 FAM162BQ5T6X4 162 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 LINC00336Q6ZUF6 198 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 OR2T6Q8NHC8 308 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 ATRQ13535 2644 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 MAP1LC3B2A6NCE7 125 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 ZNF705EA8MWA4 302 aaPredicted RBP8.05□□□□□ -1.12
USP39-210ENST00000459775 PRSS46E5RG02 174 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 SMAGPQ0VAQ4 97 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 KHDC3LQ587J8 217 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 ACTL10Q5JWF8 245 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 OR13C6PQ8NH95 151 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 MIEN1Q9BRT3 115 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 MAP1LC3BQ9GZQ8 125 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 KLK15Q9H2R5 256 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 ZNF355PQ9NSJ1 428 aa8.05□□□□□ -1.12
USP39-210ENST00000459775 F11RQ9Y624 299 aaKnown RBP8.05□□□□□ -1.12
USP39-210ENST00000459775 TRAV41A0A0B4J266 112 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 SULT1A2P50226 295 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 HILS1P60008 231 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 SLC38A11Q08AI6 406 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 BTNL8Q6UX41 500 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 ZNF418Q8TF45 676 aaPredicted RBP8.04□□□□□ -1.12
USP39-210ENST00000459775 SEC11CQ9BY50 192 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 SLC25A31Q9H0C2 315 aa8.04□□□□□ -1.12
USP39-210ENST00000459775 RPL29P47914 159 aaKnown RBP8.03□□□□□ -1.12
USP39-210ENST00000459775 UBA52P62987 128 aaKnown RBP8.03□□□□□ -1.12
USP39-210ENST00000459775 C2orf83Q53S99 150 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 C19orf54Q5BKX5 351 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 Q6ZSV7 163 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 C16orf82Q7Z2V1 217 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 OR10P1Q8NGE3 313 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 BTF3L4Q96K17 158 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 UHRF2Q96PU4 802 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 ZNF471Q9BX82 626 aaPredicted RBP8.03□□□□□ -1.12
USP39-210ENST00000459775 NPFFR1Q9GZQ6 430 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 TMEM126AQ9H061 195 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 A0A0D9SG52 128 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 UBE2L5PA0A1B0GUS4 154 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 INS-IGF2F8WCM5 200 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 BCL2L11O43521 198 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 OPRK1P41145 380 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 PAFAH1B2P68402 229 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 ZNF345Q14585 488 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 RPEL1Q2QD12 228 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 TTC9CQ8N5M4 171 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 OR1S2Q8NGQ3 325 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 PRSS22Q9GZN4 317 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 SH3BGRL3Q9H299 93 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 SERTAD4Q9NUC0 356 aa8.03□□□□□ -1.12
USP39-210ENST00000459775 KANTRA0A1W2PQU2 76 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 NPIPB5A8MRT5 1133 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 IGF1P05019 195 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 CD33P20138 364 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 AMTP48728 403 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 TMEM86BQ8N661 226 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 VN1R17PQ8TDU5 208 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 ACY3Q96HD9 319 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 NDFIP1Q9BT67 221 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 IGLV11-55A0A075B6I3 123 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 IGKV1OR2-108A0A075B7D4 117 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 K7EIM0 57 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 PPIFP30405 207 aaKnown RBP8.02□□□□□ -1.13
USP39-210ENST00000459775 ZNF415Q09FC8 603 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 CACFD1Q9UGQ2 172 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 ANK2Q01484 3957 aa8.02□□□□□ -1.13
USP39-210ENST00000459775 B5MCH6 92 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 I3L2K1 104 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
USP39-210ENST00000459775 OR5G3P0C626 314 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 SUB1P53999 127 aaKnown RBP eCLIP8.01□□□□□ -1.136e-9■■■□□ 18
USP39-210ENST00000459775 IQCJQ1A5X6 159 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 ZNF705AQ6ZN79 300 aaPredicted RBP8.01□□□□□ -1.13
USP39-210ENST00000459775 C11orf44Q8N8P7 122 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 ZNF114Q8NC26 417 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 NPIPB3Q92617 1050 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 PBDC1Q9BVG4 233 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 SPANXB1Q9NS25 103 aaPredicted RBP8.01□□□□□ -1.13
USP39-210ENST00000459775 PLA2G2EQ9NZK7 142 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 DOK5Q9P104 306 aa8.01□□□□□ -1.13
USP39-210ENST00000459775 FBXL7Q9UJT9 491 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms