RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 TMUB2Q71RG4 321 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 METTL26Q96S19 204 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PFDN5Q99471 154 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SMPXQ9UHP9 88 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PFDN2Q9UHV9 154 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PXMP4Q9Y6I8 212 aa8.19□□□□□ -1.1
PRAMEF35P-201ENST00000458709 A0A1W2PS18 150 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SMCO3A2RU48 225 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 H3BRN7 92 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 YIF1AO95070 293 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HNRNPCP07910 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 OR5G3P0C626 314 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SEC11BP0C7V7 166 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 C4BPBP20851 252 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 B2MP61769 119 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PATE2Q6UY27 113 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SCGB1C1Q8TD33 95 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TMEM37Q8WXS4 190 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PHYHIPLQ96FC7 376 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 GPR82Q96P67 336 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SHANK2-AS3Q9BTD1 123 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 ARL6Q9H0F7 186 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TMEM231Q9H6L2 316 aa8.18□□□□□ -1.1
PRAMEF35P-201ENST00000458709 IGHV3OR16-8A0A075B7F1 116 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 KANTRA0A1W2PQU2 76 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 CHEK1O14757 476 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 PFDN1O60925 122 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HYPMO75409 117 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MBP02144 154 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 NPPCP23582 126 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 ATP6V0CP27449 155 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HLA-DMBP28068 263 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 C16orf54Q6UWD8 224 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 Q6ZRG5 221 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 Q6ZTC4 211 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SLC51BQ86UW2 128 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 BAP18Q8IXM2 172 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 POM121L12Q8N7R1 296 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 ZNF709Q8N972 641 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 Q8NAQ8 132 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 OR1L4Q8NGR5 311 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 GLMPQ8WWB7 406 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RNF2Q99496 336 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RSG1Q9BU20 258 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MRPL32Q9BYC8 188 aaKnown RBP8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SMIM3Q9BZL3 60 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SEPSECSQ9HD40 501 aaKnown RBP8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 DNAJC4Q9NNZ3 241 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RABAC1Q9UI14 185 aa8.17□□□□□ -1.1
PRAMEF35P-201ENST00000458709 UMAD1C9J7I0 102 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MRPS12O15235 138 aaKnown RBP8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 CA1P00915 261 aaPredicted RBP8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TPT1P13693 172 aaKnown RBP8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 M6PRP20645 277 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 GATA2P23769 480 aaPredicted RBP8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MEOX2P50222 304 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SAMD13Q5VXD3 122 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MIC13Q5XKP0 118 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 MAPKAPK5-AS1Q8N8E1 139 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RHPN1-AS1Q9BWJ2 59 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 SLC25A39Q9BZJ4 359 aaPredicted RBP8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HRH4Q9H3N8 390 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TMEM14CQ9P0S9 112 aa8.16□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TRAV10A0A0B4J240 114 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HELTA6NFD8 242 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 ZNF98A6NK75 572 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 ZNF207O43670 478 aaKnown RBP8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RBMY1A1P0DJD3 496 aaKnown RBP8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RBMY1CP0DJD4 496 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 TFPI2P48307 235 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 LYZP61626 148 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 RBMY1FQ15415 496 aaKnown RBP8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 EIF5AL1Q6IS14 154 aaKnown RBP8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 DPPA3Q6W0C5 159 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 C20orf24Q9BUV8 137 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 HIGD1AQ9Y241 93 aa8.15□□□□□ -1.1
PRAMEF35P-201ENST00000458709 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.11
PRAMEF35P-201ENST00000458709 A0A087X0K7 114 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 IGHV4-28A0A0C4DH34 117 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 ZNF253O75346 499 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 APOHP02749 345 aaPredicted RBP8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 AMBPP02760 352 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 RAB5CP51148 216 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 LGALS9BQ3B8N2 356 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 C10orf113Q5VZT2 155 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 LINC00305Q7Z4B0 112 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 HSD17B11Q8NBQ5 300 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 STXBP6Q8NFX7 210 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 SUN5Q8TC36 379 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 ST8SIA2Q92186 375 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 GRAMD2BQ96HH9 432 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 NARS2Q96I59 477 aaKnown RBP8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 FAM167A-AS1Q96KT0 104 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 SH3BGRL3Q9H299 93 aa8.14□□□□□ -1.11
PRAMEF35P-201ENST00000458709 IGKV3-7A0A075B6H7 116 aa8.13□□□□□ -1.11
PRAMEF35P-201ENST00000458709 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
PRAMEF35P-201ENST00000458709 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
PRAMEF35P-201ENST00000458709 P0DMU3 169 aa8.13□□□□□ -1.11
PRAMEF35P-201ENST00000458709 FAM231AP0DMU4 169 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms