RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TP73-AS1Q9UF72 201 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 HSPB8Q9UJY1 196 aa6.78□□□□□ -1.32
VPS50-208ENST00000458707 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 CHEK1O14757 476 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 SIVA1O15304 175 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 NKX2-8O15522 239 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 CD5LO43866 347 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 FCN3O75636 299 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 IGLV2-11P01706 119 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 CCL3L1P16619 93 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 CD24P25063 80 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 HIST1H1AQ02539 215 aaPredicted RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 HSD52Q0P140 79 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 VMA21Q3ZAQ7 101 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 RUSC1-AS1Q66K80 236 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 TMEM200BQ69YZ2 307 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 Q86TA4 180 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 C8orf46Q8TAG6 207 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 DAZAP1Q96EP5 407 aaKnown RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 PSMG3-AS1Q96PY0 264 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 VCX2Q9H322 139 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 OTORQ9NRC9 128 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 TMEM14CQ9P0S9 112 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 MUC21A0A0G2JKD1 596 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 MUC21A0A140T8X8 626 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 FBLL1A6NHQ2 334 aaKnown RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 WT1P19544 449 aaPredicted RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 SRSF6Q13247 344 aaKnown RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 DIAPH2-AS1Q14236 149 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 MUC21Q5SSG8 566 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 BOD1L2Q8IYS8 172 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 NUP37Q8NFH4 326 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 NEU4Q8WWR8 484 aaPredicted RBP6.77□□□□□ -1.33
VPS50-208ENST00000458707 PMCHL2Q9BQD1 86 aa6.77□□□□□ -1.33
VPS50-208ENST00000458707 EP300Q09472 2414 aaPredicted RBP6.76□□□□□ -1.33
VPS50-208ENST00000458707 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 OR2T8A6NH00 312 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 FAM87AP0C7U9 286 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 COX8AP10176 69 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 TNFRSF1AP19438 455 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 COL8A1P27658 744 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 RPL32P62910 135 aaKnown RBP6.76□□□□□ -1.33
VPS50-208ENST00000458707 PSG9Q00887 426 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 GAGE5Q13069 117 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 GAGE6Q13070 117 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 PRR31Q5SQ13 230 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 GTF2H5Q6ZYL4 71 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 TEX45Q8NA69 505 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 FAM215AQ9Y5M1 114 aa6.76□□□□□ -1.33
VPS50-208ENST00000458707 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 ZNF785A8K8V0 405 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 CRYGBP07316 175 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 CD40P25942 277 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 ID1P41134 155 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 DLX6P56179 175 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 GTSF1LQ9H1H1 148 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
VPS50-208ENST00000458707 ZFYVE26Q68DK2 2539 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 GAGE12HA6NDE8 117 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 CEACAM4O75871 244 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 TGFAP01135 160 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 ZNF138P52744 262 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 ATP5J2P56134 94 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 FOXI2Q6ZQN5 318 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 CIARTQ8N365 385 aaPredicted RBP6.75□□□□□ -1.33
VPS50-208ENST00000458707 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 RITA1Q96K30 269 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 ZNF747Q9BV97 191 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 TPPP3Q9BW30 176 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 SPANXA1Q9NS26 97 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 HIGD1AQ9Y241 93 aa6.75□□□□□ -1.33
VPS50-208ENST00000458707 SPENQ96T58 3664 aaKnown RBP6.74□□□□□ -1.33
VPS50-208ENST00000458707 ZGRF1Q86YA3 2104 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 TRAV8-1A0A0A6YYK1 113 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 C17orf100A8MU93 164 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 HTR1DP28221 377 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 GPR183P32249 361 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 RPL27AP46776 148 aaKnown RBP6.74□□□□□ -1.33
VPS50-208ENST00000458707 CCL8P80075 99 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 RIGQ13278 110 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 HCP5Q6MZN7 132 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 C22orf34Q6ZV56 151 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 ZADH2Q8N4Q0 377 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 KRTAP9-2Q9BYQ4 174 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 SLC25A39Q9BZJ4 359 aaPredicted RBP6.74□□□□□ -1.33
VPS50-208ENST00000458707 NGBQ9NPG2 151 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 AP5S1Q9NUS5 200 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 ERG28Q9UKR5 140 aa6.74□□□□□ -1.33
VPS50-208ENST00000458707 GCN1Q92616 2671 aaKnown RBP6.74□□□□□ -1.33
VPS50-208ENST00000458707 CEP250Q9BV73 2442 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 A0A087X0K7 114 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.73□□□□□ -1.33
VPS50-208ENST00000458707 TMEM178BH3BS89 294 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 CSN1S1P47710 185 aa6.73□□□□□ -1.33
VPS50-208ENST00000458707 SEC11AP67812 179 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms