RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 NPIPB6E9PJ23 425 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
SCFD1-203ENST00000458591 ARF6P62330 175 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 TCF15Q12870 199 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 NGBQ9NPG2 151 aa11.16□□□□□ -0.62
SCFD1-203ENST00000458591 NBASA2RRP1 2371 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 VSTM5A8MXK1 200 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 IL4P05112 153 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 FXYD7P58549 80 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 MPV17L2Q567V2 206 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 PET117Q6UWS5 81 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
SCFD1-203ENST00000458591 TRBV19A0A075B6N1 114 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 IGFL4Q6B9Z1 124 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 C12orf54Q6X4T0 127 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 HSPB8Q9UJY1 196 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 LOC105371242A0A075B767 164 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 FAM90A27PA6NNH2 459 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 SNAI2O43623 268 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 NCR2O95944 276 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 HTR1DP28221 377 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 TCTAP57738 103 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 RBPJQ06330 500 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
SCFD1-203ENST00000458591 SIGLEC15Q6ZMC9 328 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 ZNF491Q8N8L2 437 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 PSG8Q9UQ74 426 aa11.14□□□□□ -0.63
SCFD1-203ENST00000458591 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
SCFD1-203ENST00000458591 LY6LH3BQJ8 138 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 CD3EP07766 207 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 CDKN1BP46527 198 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 CDSNQ15517 529 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 HRNRQ86YZ3 2850 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-203ENST00000458591 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 HAX1O00165 279 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 NUDT3O95989 172 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 HOXB4P17483 251 aaPredicted RBP11.13□□□□□ -0.63
SCFD1-203ENST00000458591 SHANK2-AS3Q9BTD1 123 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 TMEM14CQ9P0S9 112 aa11.13□□□□□ -0.63
SCFD1-203ENST00000458591 MED13LQ71F56 2210 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 LOC389332A0A1B0GUA5 103 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 B9A039 149 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 H3BRN7 92 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 ZNF672Q499Z4 452 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-203ENST00000458591 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 C16orf54Q6UWD8 224 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 IGHV3-35A0A0C4DH35 117 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
SCFD1-203ENST00000458591 HES1Q14469 280 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 NEU4Q8WWR8 484 aaPredicted RBP11.12□□□□□ -0.63
SCFD1-203ENST00000458591 TNFRSF14Q92956 283 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 SCRT2Q9NQ03 307 aa11.12□□□□□ -0.63
SCFD1-203ENST00000458591 A0A1B0GUT8 65 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 TMEM213A2RRL7 107 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 RPS20P60866 119 aaKnown RBP11.11□□□□□ -0.63
SCFD1-203ENST00000458591 RHOGP84095 191 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 BPIFA4PQ86YQ2 179 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 RNF125Q96EQ8 232 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 SCNM1Q9BWG6 230 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 SERTM2A0A1B0GWG4 89 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 TAX1BP3O14907 124 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 TMEM190Q8WZ59 177 aa11.11□□□□□ -0.63
SCFD1-203ENST00000458591 SPTA1P02549 2419 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-203ENST00000458591 PSG3Q16557 428 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-203ENST00000458591 IGKV2D-40P01614 121 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-203ENST00000458591 IFI27P40305 119 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-203ENST00000458591 NDPQ00604 133 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 PAX2Q02962 417 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 DYNAPQ8N1N2 210 aa11.1□□□□□ -0.63
SCFD1-203ENST00000458591 MUC6Q6W4X9 2439 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 A0A087X0K7 114 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 RIGQ13278 110 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 CFHR4Q92496 578 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 ANKHD1Q8IWZ3 2542 aaKnown RBP11.09□□□□□ -0.63
SCFD1-203ENST00000458591 F8W735 103 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-203ENST00000458591 NBR2O15453 112 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 COTL1Q14019 142 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 TMEM75Q8N9X5 138 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 Q8TAT8 98 aa11.09□□□□□ -0.63
SCFD1-203ENST00000458591 TRBV6-1A0A0K0K1D8 114 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 A0A1B0GW15 77 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 SMKR1H3BMG3 65 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 GNG7O60262 68 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 RNF151Q2KHN1 245 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 AMN1Q8IY45 258 aa11.08□□□□□ -0.64
SCFD1-203ENST00000458591 AP5S1Q9NUS5 200 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms