RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 PARLQ9H300 379 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 AAMDCQ9H7C9 122 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 OTORQ9NRC9 128 aa6.9□□□□□ -1.3
VPS50-207ENST00000458530 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
VPS50-207ENST00000458530 WNK1Q9H4A3 2382 aa6.9□□□□□ -1.31
VPS50-207ENST00000458530 K7EQM0 130 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 ZNF253O75346 499 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
VPS50-207ENST00000458530 LGALS1P09382 135 aaKnown RBP6.89□□□□□ -1.31
VPS50-207ENST00000458530 AKR1C3P42330 323 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 CNN1P51911 297 aaKnown RBP6.89□□□□□ -1.31
VPS50-207ENST00000458530 SUMO1P63165 101 aaKnown RBP6.89□□□□□ -1.31
VPS50-207ENST00000458530 KIAA0141Q14154 515 aaPredicted RBP6.89□□□□□ -1.31
VPS50-207ENST00000458530 ZNF329Q86UD4 541 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 C5orf17Q8NAS9 161 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 CMTM2Q8TAZ6 248 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 MYOZ3Q8TDC0 251 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 BLNKQ8WV28 456 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 UBE2E2Q96LR5 201 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 DUX5Q96PT3 197 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 KLK15Q9H2R5 256 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 LY96Q9Y6Y9 160 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 CMYA5Q8N3K9 4069 aa6.89□□□□□ -1.31
VPS50-207ENST00000458530 A0A087WWC5 75 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 SERTM2A0A1B0GWG4 89 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 GGTLC3B5MD39 225 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 C9JCJ5 164 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 PPP5D1E7EU14 171 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 NDUFB4O95168 129 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 SLC25A5P05141 298 aaKnown RBP6.88□□□□□ -1.31
VPS50-207ENST00000458530 CRYBB3P26998 211 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 LEMD1Q68G75 181 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 ARL6IP6Q8N6S5 226 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 KLHDC1Q8N7A1 406 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 C20orf24Q9BUV8 137 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 Q9H3A6 140 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 C16orf95Q9H693 158 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 SDF2L1Q9HCN8 221 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 SERTAD4Q9NUC0 356 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 CLEC5AQ9NY25 188 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 UFC1Q9Y3C8 167 aa6.88□□□□□ -1.31
VPS50-207ENST00000458530 TRBV19A0A075B6N1 114 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 A0A087X0K7 114 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 IGHV3-35A0A0C4DH35 117 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 C7orf77A4D0Y5 90 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 PGPA6NDG6 321 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 HELTA6NFD8 242 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 FBLL1A6NHQ2 334 aaKnown RBP6.87□□□□□ -1.31
VPS50-207ENST00000458530 K7EMT4 169 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 PEX7O00628 323 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 NDUFA7O95182 113 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 MT-ND4LP03901 98 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 CSN1S1P47710 185 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 GNG4P50150 75 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 TAS2R60P59551 318 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 UBE2G1P62253 170 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 RANP62826 216 aaKnown RBP6.87□□□□□ -1.31
VPS50-207ENST00000458530 ADIRFQ15847 76 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 SAMD13Q5VXD3 122 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 HIST2H2BDQ6DRA6 164 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 Q6ZSV7 163 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 GPHB5Q86YW7 130 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 SLC50A1Q9BRV3 221 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 ATG101Q9BSB4 218 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 CTDSP1Q9GZU7 261 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 BIN3Q9NQY0 253 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
VPS50-207ENST00000458530 SMCO4Q9NRQ5 59 aa6.87□□□□□ -1.31
VPS50-207ENST00000458530 ZNF785A8K8V0 405 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 PPP1R2P9O14990 202 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 BUB3O43684 328 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 MYCNOSP40205 109 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 RPL35P42766 123 aaKnown RBP6.86□□□□□ -1.31
VPS50-207ENST00000458530 CDX1P47902 265 aaPredicted RBP6.86□□□□□ -1.31
VPS50-207ENST00000458530 BTN1A1Q13410 526 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 C2CD4CQ8TF44 421 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 C4orf3Q8WVX3 66 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 ANAPC16Q96DE5 110 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 FMC1Q96HJ9 113 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 ESM1Q9NQ30 184 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 ZNF586Q9NXT0 402 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 EPDR1Q9UM22 224 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 U3KQE9 123 aa6.86□□□□□ -1.31
VPS50-207ENST00000458530 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
VPS50-207ENST00000458530 ZNF320A2RRD8 509 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 CXorf65A6NEN9 183 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 M0QZ24 198 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 MRPS12O15235 138 aaKnown RBP6.85□□□□□ -1.31
VPS50-207ENST00000458530 SCO1O75880 301 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 TRBV12-3P01733 135 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 RPL23P62829 140 aaKnown RBP6.85□□□□□ -1.31
VPS50-207ENST00000458530 KHDC1LQ5JSQ8 128 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 ATRAIDQ6UW56 229 aa6.85□□□□□ -1.31
VPS50-207ENST00000458530 C16orf54Q6UWD8 224 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms