RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 C20orf173Q96LM9 149 aa6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 PAXXQ9BUH6 204 aa6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 MRPL32Q9BYC8 188 aaKnown RBP6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 NRN1Q9NPD7 142 aa6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 AURKAIP1Q9NWT8 199 aaPredicted RBP6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 CMYA5Q8N3K9 4069 aa6.48□□□□□ -1.37
CLTCL1-204ENST00000458188 KMT2CQ8NEZ4 4911 aaKnown RBP6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 TRAV8-2A0A0B4J237 113 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 OR4C46A6NHA9 309 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 S100A7P31151 101 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 DEFB131AP59861 70 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 PSMG4Q5JS54 123 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 Q8N1Y9 231 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 PCNPQ8WW12 178 aaKnown RBP6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 FXYD5Q96DB9 178 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 SPAG8Q99932 426 aaPredicted RBP6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 NOTCH3Q9UM47 2321 aa6.47□□□□□ -1.37
CLTCL1-204ENST00000458188 TRBV19A0A075B6N1 114 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 CTXND1A0A1B0GTU2 59 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF705FA8MVS1 300 aaPredicted RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 OR11H12B2RN74 326 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 F6UB75 175 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 SOCS3O14543 225 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 NDUFB4O95168 129 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 CD5P06127 495 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 NBEAP1P0C6P0 100 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF705DP0CH99 300 aaPredicted RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF705BP0CI00 300 aaPredicted RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 STAG3L2P0CL84 134 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 STAG3L3P0CL85 134 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 ARL14EPLP0DKL9 152 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 HIST1H1EP10412 219 aaKnown RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 TAS2R45P59539 299 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 RANP62826 216 aaKnown RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 UBE2L3P68036 154 aaKnown RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 ODF3L2Q3SX64 289 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 KPRPQ5T749 579 aaPredicted RBP6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 EXOC3-AS1Q8N2X6 119 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 SFT2D1Q8WV19 159 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 GPR82Q96P67 336 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 CITED4Q96RK1 184 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 MAP6D1Q9H9H5 199 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 C19orf73Q9NVV2 129 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
CLTCL1-204ENST00000458188 A0A087X0K7 114 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 MAP1LC3B2A6NCE7 125 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 PRAC2D3DTV9 90 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 K7EIL1 84 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 IGKV3-20P01619 116 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 H2AFB1P0C5Y9 115 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 GCHFRP30047 84 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 SULT1A2P50226 295 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 UBE2G2P60604 165 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 CCL20P78556 96 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 KHDC3LQ587J8 217 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 EIF5AL1Q6IS14 154 aaKnown RBP6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 GTSCR1Q86UQ5 136 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 SAT2Q96F10 170 aaPredicted RBP6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 PHYHIPLQ96FC7 376 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 MAP1LC3BQ9GZQ8 125 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 HRH4Q9H3N8 390 aa6.45□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 UMAD1C9J7I0 102 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 M0R3E3 92 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 CXorf1O96002 111 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 RPL35AP18077 110 aaKnown RBP6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 ID1P41134 155 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 SNRPD3P62318 126 aaKnown RBP6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 ICAM4Q14773 271 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 ACTL10Q5JWF8 245 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 GDF5OSQ5U4N7 250 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF331Q9NQX6 463 aaPredicted RBP6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 RNF24Q9Y225 148 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 RYR3Q15413 4870 aa6.44□□□□□ -1.38
CLTCL1-204ENST00000458188 TRAV2A0A0B4J234 112 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 PGPA6NDG6 321 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 TEX46H3BTG2 121 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 ISLRO14498 428 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 IGHV4-30-4P0DP06 118 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 PSMB3P49720 205 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 MEOX2P50222 304 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 PSG3Q16557 428 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 GUK1Q16774 197 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 TEX261Q6UWH6 196 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 PQLC2Q6ZP29 291 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF738Q8NE65 137 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 ZNF680Q8NEM1 530 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 MRAPQ8TCY5 172 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 MBD3L1Q8WWY6 194 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 ASCL2Q99929 193 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 Q9H3A6 140 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 TUBA4BQ9H853 241 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 SRD5A3Q9H8P0 318 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 ZMAT5Q9UDW3 170 aaKnown RBP6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 RPH3ALQ9UNE2 315 aa6.43□□□□□ -1.38
CLTCL1-204ENST00000458188 YTHDF2Q9Y5A9 579 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms