RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 TMEM136Q6ZRR5 245 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 SLC25A2Q9BXI2 301 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 PKDREJQ9NTG1 2253 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 PLAUP00749 431 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 REG1AP05451 166 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 KRTDAPP60985 99 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 WT1-ASQ06250 92 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 Q0VG73 95 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 TEX36Q5VZQ5 186 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 SIGLECL1Q8N7X8 197 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 OR4C13Q8NGP0 309 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 OSR1Q8TAX0 266 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-207ENST00000458046 CCL17Q92583 94 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 FNDC4Q9H6D8 234 aaPredicted RBP9.38□□□□□ -0.91
SYNE2-207ENST00000458046 TANC2Q9HCD6 1990 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 A0A1W2PRE2 83 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 CHEK1O14757 476 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 LEPP41159 167 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 LYPD2Q6UXB3 125 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 IGF2BP2-AS1Q96M15 143 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 C19orf24Q9BVV8 132 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 ARL2-SNX15V9GYD0 113 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 PCNX1Q96RV3 2341 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 H3BTX0 84 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 ISLRO14498 428 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 COX7A2P2O60397 106 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF253O75346 499 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 Q6ZS92 163 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF355PQ9NSJ1 428 aa9.38□□□□□ -0.91
SYNE2-207ENST00000458046 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
SYNE2-207ENST00000458046 GPX1P07203 203 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 SRIP30626 198 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 RBMXL3Q8N7X1 1067 aaKnown RBP9.37□□□□□ -0.91
SYNE2-207ENST00000458046 C11orf45Q8TAV5 145 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 RITA1Q96K30 269 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 SIGLEC9Q9Y336 463 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 AMMECR1Q9Y4X0 333 aaPredicted RBP9.37□□□□□ -0.91
SYNE2-207ENST00000458046 TACC2O95359 2948 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 NAV3Q8IVL0 2385 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 DPRXA6NFQ7 191 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 APELAP0DMC3 54 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 GATA3P23771 443 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 BRS3P32247 399 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 IGFL3Q6UXB1 125 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 TEX43Q6ZNM6 134 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 DTX2Q86UW9 622 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 PNKDQ8N490 385 aa9.37□□□□□ -0.91
SYNE2-207ENST00000458046 PLXNB1O43157 2135 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 IGHV3-72A0A0B4J1Y9 119 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 C20orf202A1L168 122 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 PRYO14603 147 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 AMTP48728 403 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 GAGE5Q13069 117 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 GAGE6Q13070 117 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 PRR31Q5SQ13 230 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 C10orf113Q5VZT2 155 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 RUSC1-AS1Q66K80 236 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 PAXXQ9BUH6 204 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 VAMP8Q9BV40 100 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 TPSG1Q9NRR2 321 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 SMIM27A0A1W2PRY6 76 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 A0A1W2PS18 150 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 BMPR1BO00238 502 aa9.36□□□□□ -0.91
SYNE2-207ENST00000458046 RPL35AP18077 110 aaKnown RBP9.36□□□□□ -0.91
SYNE2-207ENST00000458046 USF1P22415 310 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-207ENST00000458046 PRB3Q04118 309 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-207ENST00000458046 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
SYNE2-207ENST00000458046 MRPL32Q9BYC8 188 aaKnown RBP9.36□□□□□ -0.91
SYNE2-207ENST00000458046 IGHV3-21A0A0B4J1V1 117 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 MT-ND6P03923 174 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 ORM2P19652 201 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 DLX1P56177 255 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 GNG5P63218 68 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 MEF2CQ06413 473 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-207ENST00000458046 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 TMEM30BQ3MIR4 351 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 HCP5Q6MZN7 132 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 FAM57AQ8TBR7 257 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 NRN1Q9NPD7 142 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 IGKV1D-37A0A075B6S9 117 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 A0A0G2JNJ9 132 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 C16orf97H3BN30 126 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 APCSP02743 223 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 PPIFP30405 207 aaKnown RBP9.35□□□□□ -0.91
SYNE2-207ENST00000458046 BATFQ16520 125 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 NUP37Q8NFH4 326 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 SPATA3Q8NHX4 192 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 TMEM167AQ8TBQ9 72 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 BLNKQ8WV28 456 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 MIEN1Q9BRT3 115 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 MS4A6AQ9H2W1 248 aa9.35□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF331Q9NQX6 463 aaPredicted RBP9.35□□□□□ -0.91
SYNE2-207ENST00000458046 Q9UFV3 132 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms