RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 PMP2P02689 132 aa10.18□□□□□ -0.78
SF3B4-202ENST00000457312 FABP1P07148 127 aa10.18□□□□□ -0.78
SF3B4-202ENST00000457312 CCDC197Q8NCU1 140 aa10.18□□□□□ -0.78
SF3B4-202ENST00000457312 ZNF431Q8TF32 576 aaPredicted RBP10.18□□□□□ -0.78
SF3B4-202ENST00000457312 PLCXD1Q9NUJ7 323 aa10.18□□□□□ -0.78
SF3B4-202ENST00000457312 PHOX2AO14813 284 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 IBA57Q5T440 356 aaKnown RBP10.17□□□□□ -0.78
SF3B4-202ENST00000457312 REG3GQ6UW15 175 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 C10orf67Q8IYJ2 551 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 EIF4E3Q8N5X7 224 aaKnown RBP10.17□□□□□ -0.78
SF3B4-202ENST00000457312 NHLRC2Q8NBF2 726 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 CYGBQ8WWM9 190 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 RHBDL2Q9NX52 303 aa10.17□□□□□ -0.78
SF3B4-202ENST00000457312 TRGV9Q99603 122 aa10.16□□□□□ -0.78
SF3B4-202ENST00000457312 ACOT13Q9NPJ3 140 aa10.16□□□□□ -0.78
SF3B4-202ENST00000457312 DIABLOQ9NR28 239 aa10.16□□□□□ -0.78
SF3B4-202ENST00000457312 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 MYL9P24844 172 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 CIRBPQ14011 172 aaKnown RBP10.15□□□□□ -0.78
SF3B4-202ENST00000457312 TRIM16LQ309B1 348 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 STEAP1BQ6NZ63 245 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 TP53RKQ96S44 253 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 AUNIPQ9H7T9 357 aa10.15□□□□□ -0.78
SF3B4-202ENST00000457312 A0A087X0K7 114 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 PRAC2D3DTV9 90 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 LEPP41159 167 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 TOR2AQ5JU69 321 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 DAZ4Q86SG3 579 aaKnown RBP10.14□□□□□ -0.79
SF3B4-202ENST00000457312 OR10G4Q8NGN3 311 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 OR5H2Q8NGV7 314 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 SLC35E1Q96K37 410 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 ODF3Q96PU9 254 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 IFT46Q9NQC8 304 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 DAZ3Q9NR90 486 aaKnown RBP10.14□□□□□ -0.79
SF3B4-202ENST00000457312 TP53TG3Q9ULZ0 132 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 ANAPC10Q9UM13 185 aa10.14□□□□□ -0.79
SF3B4-202ENST00000457312 IGKV2D-24A0A075B6R9 120 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 CEBPZOSA8MTT3 80 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 H3BRN7 92 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 ATG12O94817 140 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 CT45A10P0DMU9 189 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 PRR3P79522 188 aaKnown RBP10.13□□□□□ -0.79
SF3B4-202ENST00000457312 LPCAT3Q6P1A2 487 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 NOXA1Q86UR1 476 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 RMI2Q96E14 147 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 VAX2Q9UIW0 290 aa10.13□□□□□ -0.79
SF3B4-202ENST00000457312 C7orf71A4D174 169 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 GABARAPH6UMI1 98 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 GABARAPO95166 117 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 TAS2R46P59540 309 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 C14orf177Q52M58 125 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 FAM122CQ6P4D5 195 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 FAM219AQ8IW50 185 aa10.12□□□□□ -0.79
SF3B4-202ENST00000457312 ZBTB8BQ8NAP8 495 aaPredicted RBP10.12□□□□□ -0.79
SF3B4-202ENST00000457312 RPL7P18124 248 aaKnown RBP10.11□□□□□ -0.79
SF3B4-202ENST00000457312 ORM2P19652 201 aa10.11□□□□□ -0.79
SF3B4-202ENST00000457312 MLLT11Q13015 90 aaPredicted RBP10.11□□□□□ -0.79
SF3B4-202ENST00000457312 C9orf163Q8N9P6 203 aa10.11□□□□□ -0.79
SF3B4-202ENST00000457312 OR10P1Q8NGE3 313 aa10.11□□□□□ -0.79
SF3B4-202ENST00000457312 RNASE11Q8TAA1 199 aaKnown RBP10.11□□□□□ -0.79
SF3B4-202ENST00000457312 TMEM147Q9BVK8 224 aa10.11□□□□□ -0.79
SF3B4-202ENST00000457312 GGTLC3B5MD39 225 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 CFDP00746 253 aaPredicted RBP10.1□□□□□ -0.79
SF3B4-202ENST00000457312 GNAO1P09471 354 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 NAT1P18440 290 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 SDIM1Q6ZPB5 146 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 ZC2HC1AQ96GY0 325 aa10.1□□□□□ -0.79
SF3B4-202ENST00000457312 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.1□□□□□ -0.79
SF3B4-202ENST00000457312 NOTOA8MTQ0 251 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 SLC25A5P05141 298 aaKnown RBP10.09□□□□□ -0.79
SF3B4-202ENST00000457312 RND3P61587 244 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 GGNBP1Q5YKI7 109 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 SPINK6Q6UWN8 80 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 SHANK2-AS3Q9BTD1 123 aa10.09□□□□□ -0.79
SF3B4-202ENST00000457312 A0A087WYN8 130 aa10.08□□□□□ -0.8
SF3B4-202ENST00000457312 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.08□□□□□ -0.8
SF3B4-202ENST00000457312 GPX4P36969 197 aaPredicted RBP10.08□□□□□ -0.8
SF3B4-202ENST00000457312 UCP3P55916 312 aa10.08□□□□□ -0.8
SF3B4-202ENST00000457312 TMEM182Q6ZP80 229 aaPredicted RBP10.08□□□□□ -0.8
SF3B4-202ENST00000457312 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
SF3B4-202ENST00000457312 A0A0A6YYH2 397 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 CRYM-AS1A6NIL9 109 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 A6NJ64 397 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 KLLNB2CW77 178 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 PITX3O75364 302 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 CIB2O75838 187 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 PFN1P07737 140 aaKnown RBP10.07□□□□□ -0.8
SF3B4-202ENST00000457312 MEF2DQ14814 521 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 C8orf59Q8N0T1 100 aaPredicted RBP10.07□□□□□ -0.8
SF3B4-202ENST00000457312 OR5H6Q8NGV6 325 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
SF3B4-202ENST00000457312 PTGES3LE9PB15 166 aa10.06□□□□□ -0.8
SF3B4-202ENST00000457312 PI3P19957 117 aa10.06□□□□□ -0.8
SF3B4-202ENST00000457312 S100A7P31151 101 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms