RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 TMEM141Q96I45 108 aa8.21□□□□□ -1.1
SCN5A-210ENST00000455624 PNRC2Q9NPJ4 139 aaKnown RBP8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE2BQ13066 116 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 SHANK2-AS3Q9BTD1 123 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 LINC00473A8K010 186 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 VWC2Q2TAL6 325 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 RFNGQ9Y644 331 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE12BA1L429 117 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 H0YIZ8 118 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE7O76087 117 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE12FP0CL80 117 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE12GP0CL81 117 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE12IP0CL82 117 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 F5P12259 2224 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 IGHV2-70DA0A0C4DH43 119 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 NTF4P34130 210 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 SPTBP11277 2137 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 A0A1B0GW64 132 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 NMSQ5H8A3 153 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 LIME1Q9H400 295 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 TMEM242Q9NWH2 141 aa8.2□□□□□ -1.1
SCN5A-210ENST00000455624 TRPM7Q96QT4 1865 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 CXCL1P09341 107 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 GAGE6Q13070 117 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 PRR30Q53SZ7 412 aaPredicted RBP8.19□□□□□ -1.1
SCN5A-210ENST00000455624 GFRA4Q9GZZ7 299 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 SPINK13Q1W4C9 94 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 J3QLI3 93 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 FGF16O43320 207 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 IGKV1-5P01602 117 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 MST1LQ2TV78 715 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 NAA38Q9BRA0 125 aaKnown RBP8.19□□□□□ -1.1
SCN5A-210ENST00000455624 TRAV8-1A0A0A6YYK1 113 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 GAS1P54826 345 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 DOPEY2Q9Y3R5 2298 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 IGHG3P01860 377 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 NDUFAF3Q9BU61 184 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 TP53TG1Q9Y2A0 90 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
SCN5A-210ENST00000455624 TRAV25A0A0B4J276 109 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 REG4Q9BYZ8 158 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 UBE2CO00762 179 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 RNASE2P10153 161 aaKnown RBP8.18□□□□□ -1.1
SCN5A-210ENST00000455624 TRBV6-6A0A0A6YYG2 114 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 AMN1Q8IY45 258 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 MRAPQ8TCY5 172 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 MYO7AQ13402 2215 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 SOCS3O14543 225 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 B3GALT5-AS1P59052 145 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 A0A087X0K7 114 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 K7ENP7 123 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 Q6ZS92 163 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 CHAC1Q9BUX1 264 aa8.18□□□□□ -1.1
SCN5A-210ENST00000455624 RHODO00212 210 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 NDUFS5O43920 106 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 PFN2P35080 140 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 HS3ST6Q96QI5 342 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 CD5LO43866 347 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 ARMS2P0C7Q2 107 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 C5orf24Q7Z6I8 188 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 A0A096LPF7 62 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 IGHV3-38A0A0C4DH36 116 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 HIST3H2BBQ8N257 126 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 IGHV1OR15-1A0A075B7D0 117 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 TCF15Q12870 199 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 ANXA2RQ3ZCQ2 193 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 TMEM14EPQ6UXP3 125 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 HIST1H2BLQ99880 126 aa8.17□□□□□ -1.1
SCN5A-210ENST00000455624 FNDC10F2Z333 226 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 PIKFYVEQ9Y2I7 2098 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 SYS1-DBNDD2H3BUS1 97 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 LINC00205P59089 165 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 TAL2Q16559 108 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 CYTL1Q9NRR1 136 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 MMP23AO75900 390 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 KIR3DS1Q14943 382 aa8.16□□□□□ -1.1
SCN5A-210ENST00000455624 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
SCN5A-210ENST00000455624 PDE6HQ13956 83 aa8.15□□□□□ -1.1
SCN5A-210ENST00000455624 SCRT2Q9NQ03 307 aa8.15□□□□□ -1.1
SCN5A-210ENST00000455624 NDUFB8O95169 186 aa8.15□□□□□ -1.1
SCN5A-210ENST00000455624 CFHR2P36980 270 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms