RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SVIPQ8NHG7 77 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 NEU4Q8WWR8 484 aaPredicted RBP9.5□□□□□ -0.89
SMPD4-213ENST00000454468 ZFP30Q9Y2G7 519 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 ARL2-SNX15V9GYD0 113 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 FLNCQ14315 2725 aa9.5□□□□□ -0.89
SMPD4-213ENST00000454468 IGKV2-40A0A087WW87 121 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-213ENST00000454468 IZUMO1RA6ND01 250 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 TMEM238C9JI98 176 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 FNDC10F2Z333 226 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 NDUFB8O95169 186 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 IGKV2D-40P01614 121 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-213ENST00000454468 TYMSP04818 313 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 PPIFP30405 207 aaKnown RBP9.49□□□□□ -0.89
SMPD4-213ENST00000454468 Q6ZN92 141 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 Q71RC1 249 aaPredicted RBP9.49□□□□□ -0.89
SMPD4-213ENST00000454468 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 A0A1W2PPR1 153 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 TEX22C9J3V5 150 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 SCGB2A1O75556 95 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 IGHV3-11P01762 117 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 FBLN7Q53RD9 439 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 MAPK1IP1LQ8NDC0 245 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 IGKV1-17P01599 117 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 CLEC3BP05452 202 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 PRTN3P24158 256 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 SAA4P35542 130 aa9.49□□□□□ -0.89
SMPD4-213ENST00000454468 CDKN1BP46527 198 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 TMEM183BQ1AE95 376 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 Q6ZWC4 215 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 GRAMD2BQ96HH9 432 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 RPP21Q9H633 154 aaKnown RBP9.48□□□□□ -0.89
SMPD4-213ENST00000454468 BMPR1BO00238 502 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 MT-ND6P03923 174 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 ATP5J2P56134 94 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 FXYD7P58549 80 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 TMEM249Q2WGJ8 235 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 DNLZQ5SXM8 178 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 TMEM116Q8NCL8 245 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 C1RLQ9NZP8 487 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 POLR3KQ9Y2Y1 108 aaPredicted RBP9.48□□□□□ -0.89
SMPD4-213ENST00000454468 CCL25O15444 150 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 NDPQ00604 133 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 C15orf32Q32M92 178 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 TMEM136Q6ZRR5 245 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 NRGNQ92686 78 aa9.48□□□□□ -0.89
SMPD4-213ENST00000454468 TRAV40A0A0B4J280 105 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 C19orf84I3L1E1 186 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 LINC00322Q6ZN03 302 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-213ENST00000454468 CLUHP3Q96NS8 147 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 GNB1LQ9BYB4 327 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 RHOGP84095 191 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
SMPD4-213ENST00000454468 IGLV2-8P01709 118 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 PAFAH1B2P68402 229 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 PRSS3P2Q8NHM4 247 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 HIF1ANQ9NWT6 349 aa9.47□□□□□ -0.89
SMPD4-213ENST00000454468 K7EIM0 57 aa9.46□□□□□ -0.89
SMPD4-213ENST00000454468 HBBP68871 147 aa9.46□□□□□ -0.89
SMPD4-213ENST00000454468 LCNL1Q6ZST4 164 aa9.46□□□□□ -0.89
SMPD4-213ENST00000454468 ZNF738Q8NE65 137 aa9.46□□□□□ -0.89
SMPD4-213ENST00000454468 C2CD3Q4AC94 2353 aa9.46□□□□□ -0.9
SMPD4-213ENST00000454468 GOSR1O95249 250 aa9.46□□□□□ -0.9
SMPD4-213ENST00000454468 YPEL3P61236 119 aaPredicted RBP9.46□□□□□ -0.9
SMPD4-213ENST00000454468 PSG8Q9UQ74 426 aa9.46□□□□□ -0.9
SMPD4-213ENST00000454468 WFDC3Q8IUB2 231 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 TSKUQ8WUA8 353 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 MTORP42345 2549 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 C8orf49Q96NF6 230 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 LINC01548A6NM66 108 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 I3L2K1 104 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 PF4V1P10720 104 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 IGF2BP2-AS1Q96M15 143 aa9.45□□□□□ -0.9
SMPD4-213ENST00000454468 A0A1W2PS18 150 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 ATP6V0E1O15342 81 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 EFNA4P52798 201 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 ZNF491Q8N8L2 437 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 FMC1Q96HJ9 113 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 OTORQ9NRC9 128 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 ZNF324O75467 553 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-213ENST00000454468 BMI1P35226 326 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 CHTOPQ9Y3Y2 248 aaKnown RBP9.44□□□□□ -0.9
SMPD4-213ENST00000454468 SOX21Q9Y651 276 aaPredicted RBP9.44□□□□□ -0.9
SMPD4-213ENST00000454468 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
SMPD4-213ENST00000454468 TMEM189A5PLL7 270 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 NDUFS8O00217 210 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 GP9P14770 177 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 TMEM75Q8N9X5 138 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 CCL19Q99731 98 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 LY96Q9Y6Y9 160 aa9.44□□□□□ -0.9
SMPD4-213ENST00000454468 PSMB11A5LHX3 300 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms