RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 K7EPK0 472 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 CCSO14618 274 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 RGS13O14921 159 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 MBPP02686 304 aaPredicted RBP9.23□□□□□ -0.93
CHD3-206ENST00000452447 AMBPP02760 352 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 CNN1P51911 297 aaKnown RBP9.23□□□□□ -0.93
CHD3-206ENST00000452447 RRN3P1Q2M238 152 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 C1orf158Q8N1D5 194 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 RNF182Q8N6D2 247 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 IGF2BP2-AS1Q96M15 143 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 GGACTQ9BVM4 153 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 ARV1Q9H2C2 271 aa9.23□□□□□ -0.93
CHD3-206ENST00000452447 TRAV8-2A0A0B4J237 113 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 LOC102723971A0A1B0GUV8 181 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 C5orf51A6NDU8 294 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 CYCSP99999 105 aaKnown RBP9.22□□□□□ -0.93
CHD3-206ENST00000452447 PXDC1Q5TGL8 231 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 FAM222AQ5U5X8 452 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 ZNF546Q86UE3 836 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 SEC22CQ9BRL7 303 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 NIPSNAP3BQ9BS92 247 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 DKK2Q9UBU2 259 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
CHD3-206ENST00000452447 LSM5Q9Y4Y9 91 aaKnown RBP9.22□□□□□ -0.93
CHD3-206ENST00000452447 A8MTW9 85 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 INSP01308 110 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 P0DMU3 169 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 FAM231AP0DMU4 169 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 FAM231CP0DMU5 169 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 SPINK13Q1W4C9 94 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 SMUG1Q53HV7 270 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 AMTNQ6UX39 209 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 OR11H7Q8NGC8 314 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 PPP1R14DQ9NXH3 145 aa9.21□□□□□ -0.93
CHD3-206ENST00000452447 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.93
CHD3-206ENST00000452447 A0A087X0K7 114 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 AGPAT2O15120 278 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 CXCL3P19876 107 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 PVALBP20472 110 aaPredicted RBP9.2□□□□□ -0.94
CHD3-206ENST00000452447 CAV2P51636 162 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 RAB31Q13636 194 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 LINC00305Q7Z4B0 112 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 M0R2Z0 102 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 COX7A2P2O60397 106 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 B2MP61769 119 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 RHOBP62745 196 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 HIST1H1AQ02539 215 aaPredicted RBP9.2□□□□□ -0.94
CHD3-206ENST00000452447 PSG3Q16557 428 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 PATE2Q6UY27 113 aa9.2□□□□□ -0.94
CHD3-206ENST00000452447 PET100P0DJ07 73 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 HTN3P15516 51 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 CAMLGP49069 296 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 Q6ZRG5 221 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 BPIFA4PQ86YQ2 179 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 OR8A1Q8NGG7 326 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 FAM210BQ96KR6 192 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 C2orf50Q96LR7 162 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 MGST2Q99735 147 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 PLA2G2EQ9NZK7 142 aa9.19□□□□□ -0.94
CHD3-206ENST00000452447 DNAH2Q9P225 4427 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 CRXO43186 299 aaPredicted RBP9.18□□□□□ -0.94
CHD3-206ENST00000452447 CST7O76096 145 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 S100A10P60903 97 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 DAD1P61803 113 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 C10orf113Q5VZT2 155 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 LCN15Q6UWW0 184 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 BAP18Q8IXM2 172 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 POM121L12Q8N7R1 296 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 CHAC2Q8WUX2 184 aa9.18□□□□□ -0.94
CHD3-206ENST00000452447 RPUSD4Q96CM3 377 aaKnown RBP9.18□□□□□ -0.94
CHD3-206ENST00000452447 TRAV12-2A0A075B6T6 113 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 FAM24AA6NFZ4 105 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 ZNF705GA8MUZ8 300 aaPredicted RBP9.17□□□□□ -0.94
CHD3-206ENST00000452447 MRPS12O15235 138 aaKnown RBP9.17□□□□□ -0.94
CHD3-206ENST00000452447 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
CHD3-206ENST00000452447 CXCL2P19875 107 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 M6PRP20645 277 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 TMEM37Q8WXS4 190 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 SLC50A1Q9BRV3 221 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 UQCC1Q9NVA1 299 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 PRELID1Q9Y255 219 aa9.17□□□□□ -0.94
CHD3-206ENST00000452447 FAT2Q9NYQ8 4349 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 AKAP14Q86UN6 197 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 STX12Q86Y82 276 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 UBE2DNLQ8IWF7 75 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 LINC01587Q99440 93 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 NMES1Q9C002 83 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 DNAJC4Q9NNZ3 241 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 ZNF331Q9NQX6 463 aaPredicted RBP9.16□□□□□ -0.94
CHD3-206ENST00000452447 LYRM9A8MSI8 78 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 RLN2P04090 185 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 PRM2P04554 102 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 GIPP09681 153 aaPredicted RBP9.16□□□□□ -0.94
CHD3-206ENST00000452447 S100A11P31949 105 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 SULT1A1P50225 295 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 HBG1P69891 147 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 HBG2P69892 147 aa9.16□□□□□ -0.94
CHD3-206ENST00000452447 OPCMLQ14982 345 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms