RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 DEFB1P60022 68 aa14.59□□□□□ -0.07
COL9A3-202ENST00000452372 GDF5OSQ5U4N7 250 aa14.59□□□□□ -0.07
COL9A3-202ENST00000452372 SPATA31B1PQ5VZV4 182 aa14.59□□□□□ -0.07
COL9A3-202ENST00000452372 LRRC20Q8TCA0 184 aa14.59□□□□□ -0.07
COL9A3-202ENST00000452372 IGLC2P0DOY2 106 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 CXCL2P19875 107 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 PLECQ15149 4684 aaKnown RBP14.58□□□□□ -0.08
COL9A3-202ENST00000452372 TMEM41BQ5BJD5 291 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 FAM78BQ5VT40 261 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 IGFL4Q6B9Z1 124 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 EBLN2Q6P2I7 272 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 LCN15Q6UWW0 184 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 INO80EQ8NBZ0 244 aaPredicted RBP14.58□□□□□ -0.08
COL9A3-202ENST00000452372 HRH4Q9H3N8 390 aa14.58□□□□□ -0.08
COL9A3-202ENST00000452372 G3V3Q6 166 aa14.57□□□□□ -0.08
COL9A3-202ENST00000452372 NUTF2P61970 127 aaKnown RBP14.57□□□□□ -0.08
COL9A3-202ENST00000452372 RNF182Q8N6D2 247 aa14.57□□□□□ -0.08
COL9A3-202ENST00000452372 CLUHP3Q96NS8 147 aa14.57□□□□□ -0.08
COL9A3-202ENST00000452372 TNFSF18Q9UNG2 199 aa14.57□□□□□ -0.08
COL9A3-202ENST00000452372 FXYD6-FXYD2A0A087WZ82 144 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 A0A0J9YX75 114 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 F6UB75 175 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 H3BQ15 152 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 SNRPCP09234 159 aaKnown RBP14.56□□□□□ -0.08
COL9A3-202ENST00000452372 C4BPBP20851 252 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 SLC50A1Q9BRV3 221 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 ZNF331Q9NQX6 463 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-202ENST00000452372 TMEM14CQ9P0S9 112 aa14.56□□□□□ -0.08
COL9A3-202ENST00000452372 RNF222A6NCQ9 220 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 ZNF266Q14584 549 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 PSG3Q16557 428 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 GUK1Q16774 197 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 FFAR4Q5NUL3 377 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 SAT2Q96F10 170 aaPredicted RBP14.55□□□□□ -0.08
COL9A3-202ENST00000452372 MRPL32Q9BYC8 188 aaKnown RBP14.55□□□□□ -0.08
COL9A3-202ENST00000452372 TIMM9Q9Y5J7 89 aa14.55□□□□□ -0.08
COL9A3-202ENST00000452372 HLA-DMBP28068 263 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 MIR17HGQ75NE6 70 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 OR4B1Q8NGF8 309 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 FAM167A-AS1Q96KT0 104 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 RARRES2Q99969 163 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 ZNF586Q9NXT0 402 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 FUT9Q9Y231 359 aa14.54□□□□□ -0.08
COL9A3-202ENST00000452372 H3BTX0 84 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 IGKV3-20P01619 116 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 HIST1H1EP10412 219 aaKnown RBP14.53□□□□□ -0.08
COL9A3-202ENST00000452372 CSNK1G2-AS1Q8NCQ2 148 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 ZNF738Q8NE65 137 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 SLC25A2Q9BXI2 301 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 C1QTNF4Q9BXJ3 329 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 CLEC5AQ9NY25 188 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 RFNGQ9Y644 331 aa14.53□□□□□ -0.08
COL9A3-202ENST00000452372 A8MTW9 85 aa14.52□□□□□ -0.09
COL9A3-202ENST00000452372 SLC17A3O00476 420 aa14.52□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF253O75346 499 aa14.52□□□□□ -0.09
COL9A3-202ENST00000452372 DUSP14O95147 198 aaKnown RBP14.52□□□□□ -0.09
COL9A3-202ENST00000452372 OR11H2Q8NH07 326 aa14.52□□□□□ -0.09
COL9A3-202ENST00000452372 PYYP10082 97 aa14.51□□□□□ -0.09
COL9A3-202ENST00000452372 RHOBP62745 196 aa14.51□□□□□ -0.09
COL9A3-202ENST00000452372 PSG9Q00887 426 aa14.51□□□□□ -0.09
COL9A3-202ENST00000452372 RPUSD4Q96CM3 377 aaKnown RBP14.51□□□□□ -0.09
COL9A3-202ENST00000452372 XCL2Q9UBD3 114 aa14.51□□□□□ -0.09
COL9A3-202ENST00000452372 TRBV19A0A075B6N1 114 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 SMLR1H3BR10 107 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 CNN1P51911 297 aaKnown RBP14.5□□□□□ -0.09
COL9A3-202ENST00000452372 PDE6HQ13956 83 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 ACOT6Q3I5F7 207 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-202ENST00000452372 Q6ZNX1 250 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 HSD17B11Q8NBQ5 300 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 OR8A1Q8NGG7 326 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 PSMG3Q9BT73 122 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-202ENST00000452372 OR51M1Q9H341 326 aa14.5□□□□□ -0.09
COL9A3-202ENST00000452372 ALMS1Q8TCU4 4167 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 A0A0J9YWU9 116 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 ARPC5O15511 151 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF705DP0CH99 300 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF705BP0CI00 300 aaPredicted RBP14.49□□□□□ -0.09
COL9A3-202ENST00000452372 M6PRP20645 277 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 ATP6V0CP27449 155 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 AMTNQ6UX39 209 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 OR2G3Q8NGZ4 309 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 PAXXQ9BUH6 204 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 SLC35B3Q9H1N7 401 aa14.49□□□□□ -0.09
COL9A3-202ENST00000452372 BORCS7-ASMTA0A0B4J1R7 106 aa14.48□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF705FA8MVS1 300 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-202ENST00000452372 ZNF705EA8MWA4 302 aaPredicted RBP14.48□□□□□ -0.09
COL9A3-202ENST00000452372 NDUFB4O95168 129 aa14.48□□□□□ -0.09
COL9A3-202ENST00000452372 NBEAP1P0C6P0 100 aa14.48□□□□□ -0.09
COL9A3-202ENST00000452372 FXYD7P58549 80 aa14.48□□□□□ -0.09
COL9A3-202ENST00000452372 RPL7L1Q6DKI1 246 aaKnown RBP14.48□□□□□ -0.09
COL9A3-202ENST00000452372 MFFQ9GZY8 342 aa14.48□□□□□ -0.09
COL9A3-202ENST00000452372 BIRC6Q9NR09 4857 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 TAAR5O14804 337 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 TAS2R45P59539 299 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 RAB2AP61019 212 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 SERF2P84101 59 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 HIST1H1AQ02539 215 aaPredicted RBP14.47□□□□□ -0.09
COL9A3-202ENST00000452372 IL17DQ8TAD2 202 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 BLNKQ8WV28 456 aa14.47□□□□□ -0.09
COL9A3-202ENST00000452372 RNF141Q8WVD5 230 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms