RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 FAM167A-AS1Q96KT0 104 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
COL3A1-203ENST00000450867 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF331Q9NQX6 463 aaPredicted RBP10.51□□□□□ -0.73
COL3A1-203ENST00000450867 FXYD6-FXYD2A0A087WZ82 144 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 TRAV5A0A0B4J249 113 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 H3BQ15 152 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 SPRY2O43597 315 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF253O75346 499 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 FAM78BQ5VT40 261 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 LINC00052Q96N35 136 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
COL3A1-203ENST00000450867 CA1P00915 261 aaPredicted RBP10.49□□□□□ -0.73
COL3A1-203ENST00000450867 C4BPBP20851 252 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 DEFB1P60022 68 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 PDE6HQ13956 83 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 PSG3Q16557 428 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 FFAR4Q5NUL3 377 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 PSMG3Q9BT73 122 aaPredicted RBP10.49□□□□□ -0.73
COL3A1-203ENST00000450867 SLC25A2Q9BXI2 301 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 FUT9Q9Y231 359 aa10.49□□□□□ -0.73
COL3A1-203ENST00000450867 SLC17A3O00476 420 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 HIST1H1EP10412 219 aaKnown RBP10.48□□□□□ -0.73
COL3A1-203ENST00000450867 NUTF2P61970 127 aaKnown RBP10.48□□□□□ -0.73
COL3A1-203ENST00000450867 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 MIR17HGQ75NE6 70 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 RNF182Q8N6D2 247 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 CSNK1G2-AS1Q8NCQ2 148 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF586Q9NXT0 402 aa10.48□□□□□ -0.73
COL3A1-203ENST00000450867 TRBV19A0A075B6N1 114 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 HMSDA8MTL9 139 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 F6UB75 175 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 M6PRP20645 277 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 RHOBP62745 196 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF345Q14585 488 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 IGFL4Q6B9Z1 124 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 AMTNQ6UX39 209 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 C1QTNF4Q9BXJ3 329 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 RFNGQ9Y644 331 aa10.47□□□□□ -0.73
COL3A1-203ENST00000450867 TAAR5O14804 337 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 NDUFB4O95168 129 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 ATP6V0CP27449 155 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 HLA-DMBP28068 263 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 SERF2P84101 59 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF738Q8NE65 137 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 LRRC20Q8TCA0 184 aa10.46□□□□□ -0.73
COL3A1-203ENST00000450867 ZNF705EA8MWA4 302 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 SMLR1H3BR10 107 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 ARPC5O15511 151 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 DUSP14O95147 198 aaKnown RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 PYYP10082 97 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 ACOT6Q3I5F7 207 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 RPL7L1Q6DKI1 246 aaKnown RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 HSD17B11Q8NBQ5 300 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 OR11H4Q8NGC9 324 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 FXYD5Q96DB9 178 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 GNPNAT1Q96EK6 184 aaPredicted RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
COL3A1-203ENST00000450867 ZNF503Q96F45 646 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 ST6GAL2Q96JF0 529 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 MFFQ9GZY8 342 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 OR51M1Q9H341 326 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 TENM2Q9NT68 2774 aa10.45□□□□□ -0.74
COL3A1-203ENST00000450867 STARD9Q9P2P6 4700 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 BORCS7-ASMTA0A0B4J1R7 106 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 H3BTX0 84 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 JTBO76095 146 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 SNRPCP09234 159 aaKnown RBP10.44□□□□□ -0.74
COL3A1-203ENST00000450867 CNN1P51911 297 aaKnown RBP10.44□□□□□ -0.74
COL3A1-203ENST00000450867 PSG9Q00887 426 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 KHDC3LQ587J8 217 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 KCNRGQ8N5I3 272 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 MUC7Q8TAX7 377 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 RARRES2Q99969 163 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 C11orf68Q9H3H3 251 aaKnown RBP10.44□□□□□ -0.74
COL3A1-203ENST00000450867 CYTL1Q9NRR1 136 aa10.44□□□□□ -0.74
COL3A1-203ENST00000450867 C3orf84H3BNL1 204 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 MBP02144 154 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 TAS2R45P59539 299 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 RAB2AP61019 212 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 ZNF705AQ6ZN79 300 aaPredicted RBP10.43□□□□□ -0.74
COL3A1-203ENST00000450867 TCTE3Q8IZS6 198 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 RPP25LQ8N5L8 163 aaKnown RBP10.43□□□□□ -0.74
COL3A1-203ENST00000450867 OR4B1Q8NGF8 309 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 OR11H2Q8NH07 326 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 PAXXQ9BUH6 204 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 SLC35B3Q9H1N7 401 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 PRELID1Q9Y255 219 aa10.43□□□□□ -0.74
COL3A1-203ENST00000450867 OR7C2O60412 319 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 AMBPP02760 352 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 PQLC2Q6ZP29 291 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 Q8NAQ8 132 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 OR10G4Q8NGN3 311 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 OR10G9Q8NGN4 311 aa10.42□□□□□ -0.74
COL3A1-203ENST00000450867 OR10G7Q8NGN6 311 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms