RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 OR1B1Q8NGR6 318 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 TM2D3Q9BRN9 247 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 ZFAND3Q9H8U3 227 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 GNG13Q9P2W3 67 aa12.81□□□□□ -0.36
PRPF40A-204ENST00000450303 TMEM213A2RRL7 107 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 CD7P09564 240 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 BCL2P10415 239 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 CCL20P78556 96 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 ICAM4Q14773 271 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 TM4SF20Q53R12 229 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 UNQ9165/PRO28630Q6UXU0 137 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 RXFP4Q8TDU9 374 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 GATAD1Q8WUU5 269 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 RNF2Q99496 336 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 DNAJC4Q9NNZ3 241 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 DAZ1Q9NQZ3 744 aaKnown RBP12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 HIGD1AQ9Y241 93 aa12.8□□□□□ -0.36
PRPF40A-204ENST00000450303 A0A1W2PS18 150 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 A8MWP6 167 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 NDUFS6O75380 124 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 C10orf113Q5VZT2 155 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 RARRES2Q99969 163 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 WFDC10AQ9H1F0 79 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 RPS10P5Q9NQ39 176 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 MANBALQ9NQG1 85 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 TECRQ9NZ01 308 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 DOK5Q9P104 306 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 MLXQ9UH92 298 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 VAX2Q9UIW0 290 aa12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 KMT2CQ8NEZ4 4911 aaKnown RBP12.79□□□□□ -0.36
PRPF40A-204ENST00000450303 PSMB3P49720 205 aa12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 FAM122CQ6P4D5 195 aa12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 GRAMD2BQ96HH9 432 aa12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
PRPF40A-204ENST00000450303 IGHV3OR16-8A0A075B7F1 116 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 A0A1W2PPV4 95 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 ZNF207O43670 478 aaKnown RBP12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 CRYBB3P26998 211 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 CDC34P49427 236 aaPredicted RBP12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 TMEM88Q6PEY1 159 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 TMEM61Q8N0U2 210 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 MUC7Q8TAX7 377 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 NIPSNAP3BQ9BS92 247 aa12.77□□□□□ -0.37
PRPF40A-204ENST00000450303 C3orf84H3BNL1 204 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 CEBPGP53567 150 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 RHOBP62745 196 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 CBLN2Q8IUK8 224 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 C15orf54Q8N8G6 183 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 MRPL32Q9BYC8 188 aaKnown RBP12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
PRPF40A-204ENST00000450303 IGHV7-4-1A0A0J9YVY3 117 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 C7orf77A4D0Y5 90 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 OR11H12B2RN74 326 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 FAM78BQ5VT40 261 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 PATE2Q6UY27 113 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 LINC00305Q7Z4B0 112 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 TMEM37Q8WXS4 190 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 SRD5A3Q9H8P0 318 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 RETNQ9HD89 108 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 SMPXQ9UHP9 88 aa12.75□□□□□ -0.37
PRPF40A-204ENST00000450303 RBMY1BA6NDE4 496 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 RBMY1EA6NEQ0 496 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 H3BRN7 92 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 RBMY1DP0C7P1 496 aaKnown RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 FGF8P55075 233 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 TAS2R45P59539 299 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 PNRC1Q12796 327 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 LINC00322Q6ZN03 302 aaPredicted RBP12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 IQCF2Q8IXL9 164 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 CYB561D1Q8N8Q1 229 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 SHANK2-AS3Q9BTD1 123 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 U3KQE9 123 aa12.74□□□□□ -0.37
PRPF40A-204ENST00000450303 B4DEV8 164 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 H3BQ15 152 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 RAB24Q969Q5 203 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 GPR82Q96P67 336 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 RHPN1-AS1Q9BWJ2 59 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 FUT9Q9Y231 359 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 PRELID1Q9Y255 219 aa12.73□□□□□ -0.37
PRPF40A-204ENST00000450303 LOC105371267A0A1B0GV96 52 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 ZNF98A6NK75 572 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 CHEK1O14757 476 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 BUB3O43684 328 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 FLI1Q01543 452 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 GCSAMLQ5JQS6 135 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 CASC10Q5T4H9 136 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
PRPF40A-204ENST00000450303 RBPMS2Q6ZRY4 209 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms