RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 HLA-DRB4X5D2U9 266 aa12.02□□□□□ -0.49
SF3A1-204ENST00000447376 A0A0D9SG52 128 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 CXCL2P19875 107 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 RHOBP62745 196 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 GUK1Q16774 197 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 GCSAMLQ5JQS6 135 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 LCN15Q6UWW0 184 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 AKAP14Q86UN6 197 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 TCTE3Q8IZS6 198 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 HSD17B11Q8NBQ5 300 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 ST6GAL2Q96JF0 529 aa12.01□□□□□ -0.49
SF3A1-204ENST00000447376 PSMG3Q9BT73 122 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-204ENST00000447376 SAV1Q9H4B6 383 aaPredicted RBP12.01□□□□□ -0.49
SF3A1-204ENST00000447376 TRAV5A0A0B4J249 113 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 H3BMM0 161 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 SOCS3O14543 225 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 MBP02144 154 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 SERF2P84101 59 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 CASC10Q5T4H9 136 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 MORN5Q5VZ52 161 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 KCNRGQ8N5I3 272 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 OR4B1Q8NGF8 309 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 ARPC5LQ9BPX5 153 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 SLC50A1Q9BRV3 221 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 HRH4Q9H3N8 390 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 TMEM14CQ9P0S9 112 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 FUT9Q9Y231 359 aa12□□□□□ -0.49
SF3A1-204ENST00000447376 A0A0J9YWU9 116 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 MRPS12O15235 138 aaKnown RBP11.99□□□□□ -0.49
SF3A1-204ENST00000447376 M6PRP20645 277 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 ATP6V0CP27449 155 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 TAS2R45P59539 299 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 RPL7L1Q6DKI1 246 aaKnown RBP11.99□□□□□ -0.49
SF3A1-204ENST00000447376 ZFAND6Q6FIF0 208 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 OR2G3Q8NGZ4 309 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 CLEC5AQ9NY25 188 aa11.99□□□□□ -0.49
SF3A1-204ENST00000447376 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
SF3A1-204ENST00000447376 DUSP14O95147 198 aaKnown RBP11.98□□□□□ -0.49
SF3A1-204ENST00000447376 IGLC2P0DOY2 106 aa11.98□□□□□ -0.49
SF3A1-204ENST00000447376 MIR17HGQ75NE6 70 aa11.98□□□□□ -0.49
SF3A1-204ENST00000447376 ZNF738Q8NE65 137 aa11.98□□□□□ -0.49
SF3A1-204ENST00000447376 OR11H4Q8NGC9 324 aa11.98□□□□□ -0.49
SF3A1-204ENST00000447376 PFDN1O60925 122 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 IGKV3-20P01619 116 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 HIST1H1EP10412 219 aaKnown RBP11.97□□□□□ -0.49
SF3A1-204ENST00000447376 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 OR10G4Q8NGN3 311 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 C17orf77Q96MU5 243 aa11.97□□□□□ -0.49
SF3A1-204ENST00000447376 A0A0J9YX75 114 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 OR7C2O60412 319 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 ZNF253O75346 499 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 C1QBP02746 253 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 C4BPBP20851 252 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 EIF5AP63241 154 aaKnown RBP11.96□□□□□ -0.49
SF3A1-204ENST00000447376 HYLS1Q96M11 299 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 CLUHP3Q96NS8 147 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 PAXXQ9BUH6 204 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 SLC25A2Q9BXI2 301 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 C11orf68Q9H3H3 251 aaKnown RBP11.96□□□□□ -0.49
SF3A1-204ENST00000447376 PPP1R14DQ9NXH3 145 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 XCL2Q9UBD3 114 aa11.96□□□□□ -0.49
SF3A1-204ENST00000447376 TRAV8-2A0A0B4J237 113 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 CXorf65A6NEN9 183 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 H3BQ15 152 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 BCL2L11O43521 198 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 MIFP14174 115 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 PSG9Q00887 426 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 PDE6HQ13956 83 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 PSG3Q16557 428 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 GDF5OSQ5U4N7 250 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 FAM167A-AS1Q96KT0 104 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
SF3A1-204ENST00000447376 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 DNAH7Q8WXX0 4024 aa11.95□□□□□ -0.5
SF3A1-204ENST00000447376 TRBV19A0A075B6N1 114 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 SNRPCP09234 159 aaKnown RBP11.94□□□□□ -0.5
SF3A1-204ENST00000447376 PYYP10082 97 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 RAB2AP61019 212 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 IGFL4Q6B9Z1 124 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 FAM122CQ6P4D5 195 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 TMUB2Q71RG4 321 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 RNF182Q8N6D2 247 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 RNF141Q8WVD5 230 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 C20orf173Q96LM9 149 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 ZNF471Q9BX82 626 aaPredicted RBP11.94□□□□□ -0.5
SF3A1-204ENST00000447376 SH3BGRL3Q9H299 93 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 CYTL1Q9NRR1 136 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 ZNF586Q9NXT0 402 aa11.94□□□□□ -0.5
SF3A1-204ENST00000447376 F6UB75 175 aa11.93□□□□□ -0.5
SF3A1-204ENST00000447376 H3BTX0 84 aa11.93□□□□□ -0.5
SF3A1-204ENST00000447376 AMBPP02760 352 aa11.93□□□□□ -0.5
SF3A1-204ENST00000447376 NBEAP1P0C6P0 100 aa11.93□□□□□ -0.5
SF3A1-204ENST00000447376 CDC34P49427 236 aaPredicted RBP11.93□□□□□ -0.5
SF3A1-204ENST00000447376 DEFB1P60022 68 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 249.2 ms