RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 RLFQ13129 1914 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 PAX9P55771 341 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 SPACA3Q8IXA5 215 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 PRSS33Q8NF86 280 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 NBL1P41271 181 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 TIMM21Q9BVV7 248 aa15.16■□□□□ 0.02
SHANK3-203ENST00000445220 E9PLN8 166 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 RNASE2P10153 161 aaKnown RBP15.15■□□□□ 0.02
SHANK3-203ENST00000445220 FAM231DQ6ZW35 169 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 PAX8Q06710 450 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE12JA6NER3 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE7O76087 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE12FP0CL80 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE12GP0CL81 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE12IP0CL82 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 GAGE4Q13068 117 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 FAM104BQ5XKR9 115 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 TP53BP1Q12888 1972 aaPredicted RBP15.15■□□□□ 0.02
SHANK3-203ENST00000445220 IGLC7A0M8Q6 106 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 IL18BPO95998 194 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 MSRB2Q9Y3D2 182 aa15.15■□□□□ 0.02
SHANK3-203ENST00000445220 TCF20Q9UGU0 1960 aaKnown RBP15.15■□□□□ 0.02
SHANK3-203ENST00000445220 ZNF474Q6S9Z5 364 aaPredicted RBP15.14■□□□□ 0.01
SHANK3-203ENST00000445220 KLHDC3Q9BQ90 382 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 LAMTOR3Q9UHA4 124 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 CUL9Q8IWT3 2517 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 FAM168AQ92567 244 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 LEPROTO15243 131 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 TAL2Q16559 108 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 COA6Q5JTJ3 125 aaKnown RBP15.14■□□□□ 0.01
SHANK3-203ENST00000445220 C14orf178Q8N769 122 aaPredicted RBP15.14■□□□□ 0.01
SHANK3-203ENST00000445220 SMIM27A0A1W2PRY6 76 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 SIVA1O15304 175 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 CD24P25063 80 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 JPT2Q9H910 190 aa15.14■□□□□ 0.01
SHANK3-203ENST00000445220 VWC2LB2RUY7 222 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 PRSS57Q6UWY2 283 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 CFHR2P36980 270 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 FHL1Q13642 323 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 C9orf139Q6ZV77 190 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 CCL25O15444 150 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 ZNF688P0C7X2 276 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 CD177Q8N6Q3 437 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 RNF5Q99942 180 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 PRB3Q04118 309 aaPredicted RBP15.13■□□□□ 0.01
SHANK3-203ENST00000445220 LYPD6BQ8NI32 183 aa15.13■□□□□ 0.01
SHANK3-203ENST00000445220 CEACAM8P31997 349 aaPredicted RBP15.12■□□□□ 0.01
SHANK3-203ENST00000445220 LY6G5BQ8NDX9 201 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 LINC00477Q96M19 166 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 VGLL1Q99990 258 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 C1QTNF4Q9BXJ3 329 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 IGHV2-70DA0A0C4DH43 119 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.12■□□□□ 0.01
SHANK3-203ENST00000445220 H0YJW9 148 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 H3BMG7 143 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 TCF15Q12870 199 aa15.12■□□□□ 0.01
SHANK3-203ENST00000445220 TMEM213A2RRL7 107 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 PRSS46E5RG02 174 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 PEMTQ9UBM1 199 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 SLC25A16P16260 332 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 FOXG1P55316 489 aaPredicted RBP15.11■□□□□ 0.01
SHANK3-203ENST00000445220 GAGE5Q13069 117 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 GAGE6Q13070 117 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 PDE6HQ13956 83 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 CEND1Q8N111 149 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 PLXNA3P51805 1871 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 Q8N8P6 123 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 ZFHX2Q9C0A1 2572 aaPredicted RBP15.11■□□□□ 0.01
SHANK3-203ENST00000445220 C20orf204Q6ZNR8 217 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 ZNF114Q8NC26 417 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 DPH3Q96FX2 82 aa15.11■□□□□ 0.01
SHANK3-203ENST00000445220 THSD7BQ9C0I4 1608 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 IGHV1-46P01743 117 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 DEFB125Q8N687 156 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 ZNF625Q96I27 306 aaPredicted RBP15.1■□□□□ 0.01
SHANK3-203ENST00000445220 TMEM75Q8N9X5 138 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 CHCHD5Q9BSY4 110 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 SPANXCQ9NY87 97 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 HAX1O00165 279 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 SPXQ9BT56 116 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 IGKV1-6A0A0C4DH72 117 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 MLANAQ16655 118 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 C15orf32Q32M92 178 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 VOPP1Q96AW1 172 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 METRNQ9UJH8 293 aa15.1■□□□□ 0.01
SHANK3-203ENST00000445220 AKAP6Q13023 2319 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 LRRK1Q38SD2 2015 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 SRRM4A7MD48 611 aaKnown RBP15.09■□□□□ 0.01
SHANK3-203ENST00000445220 LINC00205P59089 165 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 UTF1Q5T230 341 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 OR11H6Q8NGC7 330 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 DEFB104AQ8WTQ1 72 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 TRACP01848 142 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 SHANK2-AS3Q9BTD1 123 aa15.09■□□□□ 0.01
SHANK3-203ENST00000445220 HAPLN4Q86UW8 402 aa15.08■□□□□ 0.01
SHANK3-203ENST00000445220 VWA8A3KMH1 1905 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 C11orf52Q96A22 123 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 RCHY1Q96PM5 261 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 J3QKU1 62 aa15.08■□□□□ 0
SHANK3-203ENST00000445220 PMVKQ15126 192 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms