RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CTXND1A0A1B0GTU2 59 aa12.88□□□□□ -0.35
LIME1-202ENST00000444951 A0A1B0GV50 99 aa12.88□□□□□ -0.35
LIME1-202ENST00000444951 OR4C46A6NHA9 309 aa12.88□□□□□ -0.35
LIME1-202ENST00000444951 H3BQ15 152 aa12.88□□□□□ -0.35
LIME1-202ENST00000444951 MRPS12O15235 138 aaKnown RBP12.88□□□□□ -0.35
LIME1-202ENST00000444951 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
LIME1-202ENST00000444951 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.88□□□□□ -0.35
LIME1-202ENST00000444951 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
LIME1-202ENST00000444951 ZNF256Q9Y2P7 627 aaPredicted RBP12.88□□□□□ -0.35
LIME1-202ENST00000444951 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
LIME1-202ENST00000444951 IGFL4Q6B9Z1 124 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 FAM24BQ8N5W8 94 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 RNF141Q8WVD5 230 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 ZNF503Q96F45 646 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 PHYHIPLQ96FC7 376 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 C16orf92Q96LL3 132 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 ZNF586Q9NXT0 402 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 TMEM14CQ9P0S9 112 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
LIME1-202ENST00000444951 MAP1LC3B2A6NCE7 125 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 STAG3L2P0CL84 134 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 STAG3L3P0CL85 134 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 IGLC2P0DOY2 106 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 SULT1A2P50226 295 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 CD81P60033 236 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 MAP1LC3BQ9GZQ8 125 aa12.86□□□□□ -0.35
LIME1-202ENST00000444951 K7EQG2 157 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 CXorf1O96002 111 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 CD7P09564 240 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 ZNF688P0C7X2 276 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 HIST1H1EP10412 219 aaKnown RBP12.85□□□□□ -0.35
LIME1-202ENST00000444951 RAB5CP51148 216 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 DPPA3Q6W0C5 159 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 PQLC2Q6ZP29 291 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 SFT2D1Q8WV19 159 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 FXYD5Q96DB9 178 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 LINC00052Q96N35 136 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 HRH4Q9H3N8 390 aa12.85□□□□□ -0.35
LIME1-202ENST00000444951 RYR2Q92736 4967 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 A0A087X0K7 114 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 ZNF705EA8MWA4 302 aaPredicted RBP12.84□□□□□ -0.35
LIME1-202ENST00000444951 SLC17A3O00476 420 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 H2AFB1P0C5Y9 115 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 PRB4P10163 310 aaPredicted RBP12.84□□□□□ -0.35
LIME1-202ENST00000444951 GCHFRP30047 84 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 MEOX2P50222 304 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 GTSCR1Q86UQ5 136 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 RNF182Q8N6D2 247 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 TMPRSS5Q9H3S3 457 aa12.84□□□□□ -0.35
LIME1-202ENST00000444951 ZMAT5Q9UDW3 170 aaKnown RBP12.84□□□□□ -0.35
LIME1-202ENST00000444951 TRBV19A0A075B6N1 114 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 HLA-DMBP28068 263 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 ID1P41134 155 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 PSMG4Q5JS54 123 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 TEX261Q6UWH6 196 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 WWC2-AS2Q96NR7 200 aa12.83□□□□□ -0.36
LIME1-202ENST00000444951 SACSQ9NZJ4 4579 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 TRAV2A0A0B4J234 112 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 SOCS3O14543 225 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 DEFB131AP59861 70 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 SNRPD3P62318 126 aaKnown RBP12.82□□□□□ -0.36
LIME1-202ENST00000444951 GUK1Q16774 197 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 WFDC10AQ9H1F0 79 aa12.82□□□□□ -0.36
LIME1-202ENST00000444951 STAB2Q8WWQ8 2551 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 TRAV8-2A0A0B4J237 113 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 ISLRO14498 428 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 NDUFB4O95168 129 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 IFNA7P01567 189 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 PSMB3P49720 205 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
LIME1-202ENST00000444951 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 APRG1Q8IVJ8 170 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 ZNF680Q8NEM1 530 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 PCNPQ8WW12 178 aaKnown RBP12.81□□□□□ -0.36
LIME1-202ENST00000444951 MBD3L1Q8WWY6 194 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 SAT2Q96F10 170 aaPredicted RBP12.81□□□□□ -0.36
LIME1-202ENST00000444951 C20orf173Q96LM9 149 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
LIME1-202ENST00000444951 ZNF331Q9NQX6 463 aaPredicted RBP12.81□□□□□ -0.36
LIME1-202ENST00000444951 OR11H12B2RN74 326 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 DEFB1P60022 68 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 UBE2G2P60604 165 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 ZNF124Q15973 351 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 SAMD13Q5VXD3 122 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 SLC50A1Q9BRV3 221 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 TMEM167BQ9NRX6 74 aa12.8□□□□□ -0.36
LIME1-202ENST00000444951 PSG9Q00887 426 aa12.79□□□□□ -0.36
LIME1-202ENST00000444951 ICAM4Q14773 271 aa12.79□□□□□ -0.36
LIME1-202ENST00000444951 DEFB125Q8N687 156 aa12.79□□□□□ -0.36
LIME1-202ENST00000444951 ZNF738Q8NE65 137 aa12.79□□□□□ -0.36
LIME1-202ENST00000444951 ASCL2Q99929 193 aa12.79□□□□□ -0.36
LIME1-202ENST00000444951 ZNF705FA8MVS1 300 aaPredicted RBP12.78□□□□□ -0.36
LIME1-202ENST00000444951 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
LIME1-202ENST00000444951 CCL20P78556 96 aa12.78□□□□□ -0.36
LIME1-202ENST00000444951 PDE6HQ13956 83 aa12.78□□□□□ -0.36
LIME1-202ENST00000444951 PSG3Q16557 428 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms