RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 RBMY1CP0DJD4 496 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 B2MP61769 119 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 RBMY1FQ15415 496 aaKnown RBP13.49□□□□□ -0.25
CCDC188-202ENST00000444532 IGFL4Q6B9Z1 124 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 RNF182Q8N6D2 247 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF709Q8N972 641 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 RNF126Q9BV68 326 aa13.49□□□□□ -0.25
CCDC188-202ENST00000444532 MPC2O95563 127 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 CXCL3P19876 107 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 FXYD7P58549 80 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 MORN5Q5VZ52 161 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 LCN15Q6UWW0 184 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF738Q8NE65 137 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 NEU1Q99519 415 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 SLC35B3Q9H1N7 401 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 HRH4Q9H3N8 390 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 KLK5Q9Y337 293 aaPredicted RBP13.48□□□□□ -0.25
CCDC188-202ENST00000444532 PXMP4Q9Y6I8 212 aa13.48□□□□□ -0.25
CCDC188-202ENST00000444532 NANOS2P60321 138 aaKnown RBP13.47□□□□□ -0.25
CCDC188-202ENST00000444532 PSG3Q16557 428 aa13.47□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF705AQ6ZN79 300 aaPredicted RBP13.47□□□□□ -0.25
CCDC188-202ENST00000444532 PHLDA1Q8WV24 401 aaPredicted RBP13.47□□□□□ -0.25
CCDC188-202ENST00000444532 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
CCDC188-202ENST00000444532 NPCDR1Q9BY65 106 aa13.47□□□□□ -0.25
CCDC188-202ENST00000444532 DYNC2H1Q8NCM8 4307 aaKnown RBP13.47□□□□□ -0.25
CCDC188-202ENST00000444532 STARD9Q9P2P6 4700 aa13.47□□□□□ -0.25
CCDC188-202ENST00000444532 SMIM9A6NGZ8 99 aa13.46□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF705FA8MVS1 300 aaPredicted RBP13.46□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF705DP0CH99 300 aaPredicted RBP13.46□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF705BP0CI00 300 aaPredicted RBP13.46□□□□□ -0.25
CCDC188-202ENST00000444532 CNN1P51911 297 aaKnown RBP13.46□□□□□ -0.25
CCDC188-202ENST00000444532 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
CCDC188-202ENST00000444532 ZNF331Q9NQX6 463 aaPredicted RBP13.46□□□□□ -0.25
CCDC188-202ENST00000444532 AMBPP02760 352 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 IGLC2P0DOY2 106 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 CLINT1Q14677 625 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 FCN2Q15485 313 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 GUK1Q16774 197 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 THAP6Q8TBB0 222 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 MED28Q9H204 178 aa13.45□□□□□ -0.26
CCDC188-202ENST00000444532 TRAV5A0A0B4J249 113 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 HLA-DMBP28068 263 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 OR11H7Q8NGC8 314 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 WDR61Q9GZS3 305 aaKnown RBP13.44□□□□□ -0.26
CCDC188-202ENST00000444532 KCNIP2Q9NS61 270 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 GOLT1BQ9Y3E0 138 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 HSPB11Q9Y547 144 aa13.44□□□□□ -0.26
CCDC188-202ENST00000444532 H3BQ15 152 aa13.43□□□□□ -0.26
CCDC188-202ENST00000444532 RPL12P30050 165 aaKnown RBP13.43□□□□□ -0.26
CCDC188-202ENST00000444532 RPUSD4Q96CM3 377 aaKnown RBP13.43□□□□□ -0.26
CCDC188-202ENST00000444532 SAT2Q96F10 170 aaPredicted RBP13.43□□□□□ -0.26
CCDC188-202ENST00000444532 IGF2BP2-AS1Q96M15 143 aa13.43□□□□□ -0.26
CCDC188-202ENST00000444532 ATP5SQ99766 215 aa13.43□□□□□ -0.26
CCDC188-202ENST00000444532 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
CCDC188-202ENST00000444532 IGHV3OR16-12A0A075B7B8 117 aa13.42□□□□□ -0.26
CCDC188-202ENST00000444532 TMEM189A5PLL7 270 aa13.42□□□□□ -0.26
CCDC188-202ENST00000444532 SNRPCP09234 159 aaKnown RBP13.42□□□□□ -0.26
CCDC188-202ENST00000444532 TMEM14CQ9P0S9 112 aa13.42□□□□□ -0.26
CCDC188-202ENST00000444532 C11orf94C9JXX5 98 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 C17orf112F2Z3M2 114 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 SLC17A3O00476 420 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 ZNF253O75346 499 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
CCDC188-202ENST00000444532 C1orf158Q8N1D5 194 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 RFNGQ9Y644 331 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 LYSTQ99698 3801 aa13.41□□□□□ -0.26
CCDC188-202ENST00000444532 H3BTX0 84 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 RHOBP62745 196 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 SPINK13Q1W4C9 94 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 GCSAMLQ5JQS6 135 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 PPP1R14DQ9NXH3 145 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 ZNF586Q9NXT0 402 aa13.4□□□□□ -0.26
CCDC188-202ENST00000444532 BOLA2-SMG1P6H3BVE0 249 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 M0R2Z0 102 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 IFNA5P01569 189 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 HBE1P02100 147 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 HIST1H1EP10412 219 aaKnown RBP13.39□□□□□ -0.27
CCDC188-202ENST00000444532 SCGB1C1Q8TD33 95 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 RYR3Q15413 4870 aa13.39□□□□□ -0.27
CCDC188-202ENST00000444532 TRBV19A0A075B6N1 114 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
CCDC188-202ENST00000444532 INSP01308 110 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 PDE6HQ13956 83 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 TMEM208Q9BTX3 173 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 MRPL32Q9BYC8 188 aaKnown RBP13.38□□□□□ -0.27
CCDC188-202ENST00000444532 PARD6GQ9BYG4 376 aaPredicted RBP13.38□□□□□ -0.27
CCDC188-202ENST00000444532 CELA1Q9UNI1 258 aa13.38□□□□□ -0.27
CCDC188-202ENST00000444532 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 TCTAP57738 103 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 RRN3P1Q2M238 152 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 ASB13Q8WXK3 278 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 LINC00476Q8WZB0 136 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
CCDC188-202ENST00000444532 SMIM3Q9BZL3 60 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 TIMM9Q9Y5J7 89 aa13.37□□□□□ -0.27
CCDC188-202ENST00000444532 TRAV10A0A0B4J240 114 aa13.36□□□□□ -0.27
CCDC188-202ENST00000444532 PYYP10082 97 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms