RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 COX7A2P2O60397 106 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 AMBPP02760 352 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 RPL29P47914 159 aaKnown RBP13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 CNN1P51911 297 aaKnown RBP13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 CYCSP99999 105 aaKnown RBP13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 C10orf113Q5VZT2 155 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 LGALS9CQ6DKI2 356 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 BPIFA4PQ86YQ2 179 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 DNAJC4Q9NNZ3 241 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 GOLT1BQ9Y3E0 138 aa13.55□□□□□ -0.24
ATPAF2-201ENST00000444058 TRAV10A0A0B4J240 114 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 RLN2P04090 185 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 FXYD7P58549 80 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 LCN15Q6UWW0 184 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 LRRC20Q8TCA0 184 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 RFNGQ9Y644 331 aa13.54□□□□□ -0.24
ATPAF2-201ENST00000444058 MPDU1O75352 247 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 PSG3Q16557 428 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 IGFL4Q6B9Z1 124 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 Q6ZTC4 211 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 C1orf158Q8N1D5 194 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 ZNF738Q8NE65 137 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 OR1L4Q8NGR5 311 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 PFDN5Q99471 154 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 SLC50A1Q9BRV3 221 aa13.53□□□□□ -0.24
ATPAF2-201ENST00000444058 TEX48A0A1B0GUV7 120 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 E5RGE8 158 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 C12orf74Q32Q52 190 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 MIC13Q5XKP0 118 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 OR11H7Q8NGC8 314 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 OR8A1Q8NGG7 326 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 SLC25A31Q9H0C2 315 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 ZNF331Q9NQX6 463 aaPredicted RBP13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 SLC39A9Q9NUM3 307 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 CELA1Q9UNI1 258 aa13.52□□□□□ -0.25
ATPAF2-201ENST00000444058 IGHV3OR16-12A0A075B7B8 117 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 UBE2L5PA0A1B0GUS4 154 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 HBE1P02100 147 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 SPART-AS1P0CW21 52 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 B2MP61769 119 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 BAXQ07812 192 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 OPCMLQ14982 345 aa13.51□□□□□ -0.25
ATPAF2-201ENST00000444058 IGLL5B9A064 214 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 SIX6O95475 246 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 GUK1Q16774 197 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 MORN5Q5VZ52 161 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
ATPAF2-201ENST00000444058 CRXO43186 299 aaPredicted RBP13.49□□□□□ -0.25
ATPAF2-201ENST00000444058 RRN3P1Q2M238 152 aa13.49□□□□□ -0.25
ATPAF2-201ENST00000444058 RPUSD4Q96CM3 377 aaKnown RBP13.49□□□□□ -0.25
ATPAF2-201ENST00000444058 RNF126Q9BV68 326 aa13.49□□□□□ -0.25
ATPAF2-201ENST00000444058 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
ATPAF2-201ENST00000444058 BOLA2-SMG1P6H3BVE0 249 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 INSP01308 110 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 FGF7P21781 194 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 H2BFSP57053 126 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 NHLH2Q02577 135 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 SPINK13Q1W4C9 94 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 SAT2Q96F10 170 aaPredicted RBP13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 TMEM208Q9BTX3 173 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 NPCDR1Q9BY65 106 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 DKK2Q9UBU2 259 aa13.48□□□□□ -0.25
ATPAF2-201ENST00000444058 DEFB131BA0A096LNP1 70 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 H0YIZ8 118 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 M0R2Z0 102 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 ZNF253O75346 499 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 OXA1LQ15070 435 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 LRRC37A5PQ49AS3 106 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 OR5AC2Q9NZP5 309 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 TMEM14CQ9P0S9 112 aa13.47□□□□□ -0.25
ATPAF2-201ENST00000444058 EPPK1P58107 5090 aaKnown RBP13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 LOC102723971A0A1B0GUV8 181 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 H3BQ15 152 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 SSNA1O43805 119 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 PET100P0DJ07 73 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 EMP1P54849 157 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 PPP1R1CQ8WVI7 109 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 PPP1R14DQ9NXH3 145 aa13.46□□□□□ -0.25
ATPAF2-201ENST00000444058 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 TRAV5A0A0B4J249 113 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 SLC17A3O00476 420 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 TSPOP30536 169 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 RHOBP62745 196 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 FAM222AQ5U5X8 452 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 ZNF767PQ75MW2 155 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 KCNIP2Q9NS61 270 aa13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 YTHDF2Q9Y5A9 579 aaKnown RBP13.45□□□□□ -0.26
ATPAF2-201ENST00000444058 SNRPCP09234 159 aaKnown RBP13.44□□□□□ -0.26
ATPAF2-201ENST00000444058 CDKN1BP46527 198 aa13.44□□□□□ -0.26
ATPAF2-201ENST00000444058 FAM210BQ96KR6 192 aa13.44□□□□□ -0.26
ATPAF2-201ENST00000444058 NIPSNAP3BQ9BS92 247 aa13.44□□□□□ -0.26
ATPAF2-201ENST00000444058 ZNF586Q9NXT0 402 aa13.44□□□□□ -0.26
ATPAF2-201ENST00000444058 MPC2O95563 127 aa13.43□□□□□ -0.26
ATPAF2-201ENST00000444058 PDE6HQ13956 83 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms