RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 MRPL53Q96EL3 112 aaKnown RBP6.96□□□□□ -1.3
NR1I3-211ENST00000442691 DUX5Q96PT3 197 aa6.96□□□□□ -1.3
NR1I3-211ENST00000442691 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
NR1I3-211ENST00000442691 SLC50A1Q9BRV3 221 aa6.96□□□□□ -1.3
NR1I3-211ENST00000442691 PARLQ9H300 379 aa6.96□□□□□ -1.3
NR1I3-211ENST00000442691 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
NR1I3-211ENST00000442691 TLN2Q9Y4G6 2542 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 A0A087WWC5 75 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 HELTA6NFD8 242 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 H3BQ15 152 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 IGHV3-11P01762 117 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 TMEM241Q24JQ0 296 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 CLRN3Q8NCR9 226 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 GLMPQ8WWB7 406 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 TVP23CQ96ET8 276 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 ATG101Q9BSB4 218 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF586Q9NXT0 402 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 EPDR1Q9UM22 224 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 KLF12Q9Y4X4 402 aa6.95□□□□□ -1.3
NR1I3-211ENST00000442691 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-211ENST00000442691 ACANP16112 2415 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 IGHV7-4-1A0A0J9YVY3 117 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 LINC01619G3V211 115 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 K7EQM0 130 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 PEX7O00628 323 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
NR1I3-211ENST00000442691 NDUFB4O95168 129 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 CNN1P51911 297 aaKnown RBP6.94□□□□□ -1.3
NR1I3-211ENST00000442691 PROK1P58294 105 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 FHL3Q13643 280 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 KLF5Q13887 457 aaPredicted RBP6.94□□□□□ -1.3
NR1I3-211ENST00000442691 LEMD1Q68G75 181 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 C10orf99Q6UWK7 81 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 SIGLEC15Q6ZMC9 328 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 FMC1Q96HJ9 113 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 C20orf24Q9BUV8 137 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 Q9H3A6 140 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 SDF2L1Q9HCN8 221 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 TMEM242Q9NWH2 141 aa6.94□□□□□ -1.3
NR1I3-211ENST00000442691 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 PGPA6NDG6 321 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
NR1I3-211ENST00000442691 HOXD3P31249 432 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-211ENST00000442691 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
NR1I3-211ENST00000442691 GUCA2BQ16661 112 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 CMTM2Q8TAZ6 248 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-211ENST00000442691 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 RNF114Q9Y508 228 aa6.93□□□□□ -1.3
NR1I3-211ENST00000442691 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
NR1I3-211ENST00000442691 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
NR1I3-211ENST00000442691 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF561-AS1K7EIQ3 104 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 M0QZ24 198 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 TSPAN4O14817 238 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 TCRAP04437 139 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 AKR1C3P42330 323 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 RPL35P42766 123 aaKnown RBP6.92□□□□□ -1.3
NR1I3-211ENST00000442691 CSN1S1P47710 185 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 LCNL1Q6ZST4 164 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 BLNKQ8WV28 456 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 DPF1Q92782 380 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 RHPN1-AS1Q9BWJ2 59 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 TUBA4BQ9H853 241 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
NR1I3-211ENST00000442691 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-211ENST00000442691 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 A0A087WW49 117 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 ISLRO14498 428 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 CHEK1O14757 476 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 GNG4P50150 75 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 CEBPGP53567 150 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 FOXL1Q12952 345 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 OR1N2Q8NGR9 330 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
NR1I3-211ENST00000442691 MLXQ9UH92 298 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms