RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 DLX6P56179 175 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 COX19Q49B96 90 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 RBPMS2Q6ZRY4 209 aaKnown RBP10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 TMEM75Q8N9X5 138 aa10.39□□□□□ -0.75
SLC48A1-201ENST00000442218 IGHV3-66A0A0C4DH42 116 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 TEX22C9J3V5 150 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 LTAP01374 205 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 IGKV1-17P01599 117 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 C8orf46Q8TAG6 207 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 NCOR1P1Q9H4R4 102 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 TOMM40O96008 361 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 TMEM11P17152 192 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 NUP37Q8NFH4 326 aa10.38□□□□□ -0.75
SLC48A1-201ENST00000442218 MYO18BQ8IUG5 2567 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 IGKV2-40A0A087WW87 121 aaPredicted RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 PPIAL4CA0A0B4J2A2 164 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 IGKV2D-40P01614 121 aaPredicted RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 PPIAL4GP0DN37 164 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 PPIFP30405 207 aaKnown RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 USP9YO00507 2555 aaPredicted RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 CREBBPQ92793 2442 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 IGLV2-11P01706 119 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 JKAMPQ9P055 326 aa10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 F11RQ9Y624 299 aaKnown RBP10.37□□□□□ -0.75
SLC48A1-201ENST00000442218 IGHV3-49A0A0A0MS15 119 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 BUB1B-PAK6H3BSN5 160 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 S100A7P31151 101 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 IFI27P40305 119 aaPredicted RBP10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 CRIP1P50238 77 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 RBPJQ06330 500 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 GAGE1Q13065 139 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 OR4C5Q8NGB2 326 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 PRSS3P2Q8NHM4 247 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 TRGV9Q99603 122 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 NCBP2LA6PVI3 153 aaKnown RBP10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 OR2J3O76001 311 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 MC5RP33032 325 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 KLF5Q13887 457 aaPredicted RBP10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 TM4SF20Q53R12 229 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 ZNF738Q8NE65 137 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 FMC1Q96HJ9 113 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 PRSS22Q9GZN4 317 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 PKD1L2Q7Z442 2459 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 ETFRF1Q6IPR1 90 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
SLC48A1-201ENST00000442218 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 CRYGCP07315 174 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 LGALS7P47929 136 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 KLRB1Q12918 225 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 LY6DQ14210 128 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 PRSS57Q6UWY2 283 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 NDUFS7O75251 213 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 C3orf36Q3SXR2 165 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 STXBP6Q8NFX7 210 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 C18orf15Q96N68 181 aa10.35□□□□□ -0.75
SLC48A1-201ENST00000442218 DOPEY2Q9Y3R5 2298 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 LOC105371242A0A075B767 164 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 NGBQ9NPG2 151 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 PSG8Q9UQ74 426 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 HSBP1L1C9JCN9 74 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 D6R8Y8 96 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 HLA-DRB1P01911 266 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 ATP5IP56385 69 aaPredicted RBP10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 OR4A5Q8NH83 315 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 MAP1LC3CQ9BXW4 147 aa10.34□□□□□ -0.75
SLC48A1-201ENST00000442218 A0A1B0GUT8 65 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 I3L2K1 104 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 K7EIM0 57 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 CCL21O00585 134 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 AMMECR1LQ6DCA0 310 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 CHRDL1Q9BU40 450 aa10.33□□□□□ -0.75
SLC48A1-201ENST00000442218 NPIPB5A8MRT5 1133 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 IGLV1-47P01700 117 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 SLC25A34Q6PIV7 304 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 LYZL1Q6UWQ5 148 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 K7EMI3 77 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 GNG7O60262 68 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 UBE2V1Q13404 147 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 RNF125Q96EQ8 232 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
SLC48A1-201ENST00000442218 SPRY2O43597 315 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 SFTPCP11686 197 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 NEU4Q8WWR8 484 aaPredicted RBP10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 TTTY13Q9BZ97 58 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 MRPS16Q9Y3D3 137 aaKnown RBP10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 TRBV19A0A075B6N1 114 aa10.32□□□□□ -0.76
SLC48A1-201ENST00000442218 ZNF207O43670 478 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms