RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 BMI1P35226 326 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 OR8A1Q8NGG7 326 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 Q9H3A6 140 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 TACC2O95359 2948 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 A0A096LNJ9 63 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 ORM2P19652 201 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 TIMM23BQ5SRD1 257 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 PRSS57Q6UWY2 283 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 Q86TA4 180 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 SIGMAR1Q99720 223 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 RPUSD1Q9UJJ7 312 aaKnown RBP9.48□□□□□ -0.89
LTBR-203ENST00000441074 INSIG2Q9Y5U4 225 aa9.48□□□□□ -0.89
LTBR-203ENST00000441074 PKDREJQ9NTG1 2253 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 E7EUB6 86 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 SPRY3O43610 288 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 AZU1P20160 251 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 WT1-ASQ06250 92 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 CDSNQ15517 529 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 SAMD5Q5TGI4 173 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 MRPL36Q9P0J6 103 aaKnown RBP9.47□□□□□ -0.89
LTBR-203ENST00000441074 ZNF462Q96JM2 2506 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 HEATR1Q9H583 2144 aaKnown RBP9.47□□□□□ -0.89
LTBR-203ENST00000441074 IGHV3-48P01763 117 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 ARMS2P0C7Q2 107 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 GP9P14770 177 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 GRNP28799 593 aaKnown RBP9.47□□□□□ -0.89
LTBR-203ENST00000441074 RPL24P83731 157 aaKnown RBP9.47□□□□□ -0.89
LTBR-203ENST00000441074 CIARTQ8N365 385 aaPredicted RBP9.47□□□□□ -0.89
LTBR-203ENST00000441074 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 GAFA1Q96PS6 74 aa9.47□□□□□ -0.89
LTBR-203ENST00000441074 PPIAL4CA0A0B4J2A2 164 aa9.46□□□□□ -0.9
LTBR-203ENST00000441074 IFI27P40305 119 aaPredicted RBP9.46□□□□□ -0.9
LTBR-203ENST00000441074 MEF2CQ06413 473 aaPredicted RBP9.46□□□□□ -0.9
LTBR-203ENST00000441074 TMEM116Q8NCL8 245 aa9.46□□□□□ -0.9
LTBR-203ENST00000441074 TANC2Q9HCD6 1990 aa9.46□□□□□ -0.9
LTBR-203ENST00000441074 TRBV6-1A0A0K0K1D8 114 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 TEX48A0A1B0GUV7 120 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 hADV38S2A0JD32 116 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 CGB1A6NKQ9 187 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 GOSR1O95249 250 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 FAM106CPP0CH98 169 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 ZNF833PQ6ZTB9 187 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 TRGV9Q99603 122 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 OTORQ9NRC9 128 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 DSCAML1Q8TD84 2053 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 C22orf46C9J442 243 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 IGLV2-11P01706 119 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 CACNG7P62955 275 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 TNFAIP6P98066 277 aaPredicted RBP9.45□□□□□ -0.9
LTBR-203ENST00000441074 LOXL1Q08397 574 aaPredicted RBP9.45□□□□□ -0.9
LTBR-203ENST00000441074 FAM201AQ5SY85 155 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 ZNF788Q6ZQV5 615 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
LTBR-203ENST00000441074 RND1Q92730 232 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 LINC00312Q9Y6C7 94 aa9.45□□□□□ -0.9
LTBR-203ENST00000441074 TRAV8-1A0A0A6YYK1 113 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 C16orf97H3BN30 126 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 THBDP07204 575 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 HOXB4P17483 251 aaPredicted RBP9.44□□□□□ -0.9
LTBR-203ENST00000441074 ZNF493Q6ZR52 646 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 PRNTQ86SH4 94 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 MRPL20Q9BYC9 149 aaKnown RBP9.44□□□□□ -0.9
LTBR-203ENST00000441074 GTSF1LQ9H1H1 148 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 SIGLEC8Q9NYZ4 499 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 SPTAN1Q13813 2472 aaKnown RBP9.44□□□□□ -0.9
LTBR-203ENST00000441074 PPIAL4EA0A075B759 164 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 A0A1B0GV72 72 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 ZNF785A8K8V0 405 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 H3BTX0 84 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 CRYGCP07315 174 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 CT45A10P0DMU9 189 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 PPIAL4FP0DN26 164 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 CD40P25942 277 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
LTBR-203ENST00000441074 Q6AWC8 147 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 PCP2Q8IVA1 136 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 OR10X1Q8NGY0 326 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 ZNRD1Q9P1U0 126 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 U3KQK5 164 aa9.44□□□□□ -0.9
LTBR-203ENST00000441074 VPS13CQ709C8 3753 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 TEX36Q5VZQ5 186 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 C8orf46Q8TAG6 207 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 FLYWCH2Q96CP2 140 aaKnown RBP9.43□□□□□ -0.9
LTBR-203ENST00000441074 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 IGHV1-46P01743 117 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 BSPH1Q075Z2 132 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 C10orf55Q5SWW7 151 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 DUX4L9Q6RFH8 374 aaPredicted RBP9.43□□□□□ -0.9
LTBR-203ENST00000441074 GOLT1AQ6ZVE7 132 aa9.43□□□□□ -0.9
LTBR-203ENST00000441074 CCL13Q99616 98 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms