RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 TMEM89A2RUT3 159 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 SMAD7O15105 426 aaKnown RBP11.57□□□□□ -0.56
LINC00163-202ENST00000439088 LTAP01374 205 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 IGHG4P01861 327 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 IBA57Q5T440 356 aaKnown RBP11.57□□□□□ -0.56
LINC00163-202ENST00000439088 FAM231DQ6ZW35 169 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 SGK494Q96LW2 274 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 MLST8Q9BVC4 326 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 U3KQE9 123 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF253O75346 499 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 S100A6P06703 90 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 GOLT1AQ6ZVE7 132 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
LINC00163-202ENST00000439088 K7EQM0 130 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 RPEL1Q2QD12 228 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 OR4X2Q8NGF9 303 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF320A2RRD8 509 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 NDUFA4O00483 81 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 TRBV12-3P01733 135 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 IGHV3-11P01762 117 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 PSMB8P28062 276 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 AKR1D1P51857 326 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 NPFFR1Q9GZQ6 430 aa11.56□□□□□ -0.56
LINC00163-202ENST00000439088 A0A087X0K7 114 aa11.55□□□□□ -0.56
LINC00163-202ENST00000439088 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
LINC00163-202ENST00000439088 PHOX2AO14813 284 aa11.55□□□□□ -0.56
LINC00163-202ENST00000439088 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF785A8K8V0 405 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 CSN1S1P47710 185 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 SNRPEP62304 92 aaKnown RBP11.54□□□□□ -0.56
LINC00163-202ENST00000439088 FAM209BQ5JX69 171 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 TMEM183AQ8IXX5 376 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 NUDT10Q8NFP7 164 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 NUDT11Q96G61 164 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 SERTAD4Q9NUC0 356 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 FASNP49327 2511 aaKnown RBP11.54□□□□□ -0.56
LINC00163-202ENST00000439088 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF705GA8MUZ8 300 aaPredicted RBP11.54□□□□□ -0.56
LINC00163-202ENST00000439088 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
LINC00163-202ENST00000439088 CTAG1AP78358 180 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 LCNL1Q6ZST4 164 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 Q86TA4 180 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 SIGLECL1Q8N7X8 197 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF702PQ9H963 129 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 ZANQ9Y493 2812 aa11.54□□□□□ -0.56
LINC00163-202ENST00000439088 TRAV8-1A0A0A6YYK1 113 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 M0R3E3 92 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF207O43670 478 aaKnown RBP11.53□□□□□ -0.56
LINC00163-202ENST00000439088 GATCO43716 136 aaKnown RBP11.53□□□□□ -0.56
LINC00163-202ENST00000439088 PSG3Q16557 428 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 PRNTQ86SH4 94 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 FRZBQ92765 325 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF331Q9NQX6 463 aaPredicted RBP11.53□□□□□ -0.56
LINC00163-202ENST00000439088 ZFP30Q9Y2G7 519 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 CREBBPQ92793 2442 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 IGHV3-66A0A0C4DH42 116 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 SMIM27A0A1W2PRY6 76 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BKO60814 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BJP06899 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BOP23527 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BBP33778 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BDP58876 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BCP62807 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST2H2BEQ16778 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.53□□□□□ -0.56
LINC00163-202ENST00000439088 PRR27Q6MZM9 219 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BHQ93079 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BNQ99877 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 HIST1H2BMQ99879 126 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 ZNF492Q9P255 531 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
LINC00163-202ENST00000439088 TRGC1P0CF51 173 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 MEOX2P50222 304 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 SLC35B1P78383 322 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 UNQ9165/PRO28630Q6UXU0 137 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 TMEM86BQ8N661 226 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 GRAMD2BQ96HH9 432 aa11.52□□□□□ -0.57
LINC00163-202ENST00000439088 PEF1Q9UBV8 284 aaKnown RBP11.52□□□□□ -0.57
LINC00163-202ENST00000439088 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 C16orf54Q6UWD8 224 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 IL17RELQ6ZVW7 336 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 C12orf57Q99622 126 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 IGHV3-49A0A0A0MS15 119 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 CD5LO43866 347 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
LINC00163-202ENST00000439088 Q8N2B8 174 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 PDZD2O15018 2839 aa11.51□□□□□ -0.57
LINC00163-202ENST00000439088 TEX15Q9BXT5 2789 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 C19orf71A6NCJ1 209 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 FBLL1A6NHQ2 334 aaKnown RBP11.5□□□□□ -0.57
LINC00163-202ENST00000439088 UBE2CO00762 179 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 ELANEP08246 267 aa11.5□□□□□ -0.57
LINC00163-202ENST00000439088 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms