RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 IGLC2P0DOY2 106 aa9.61□□□□□ -0.87
LINC00399-201ENST00000439008 ATF4P18848 351 aaPredicted RBP9.61□□□□□ -0.87
LINC00399-201ENST00000439008 SPATA31B1PQ5VZV4 182 aa9.61□□□□□ -0.87
LINC00399-201ENST00000439008 ELOA3CA0A087WX78 387 aaPredicted RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 ZNF705EA8MWA4 302 aaPredicted RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 RPL12P30050 165 aaKnown RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 RAB31Q13636 194 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 OXA1LQ15070 435 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 SAT2Q96F10 170 aaPredicted RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 SMIM3Q9BZL3 60 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 MED28Q9H204 178 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 ZNF331Q9NQX6 463 aaPredicted RBP9.6□□□□□ -0.87
LINC00399-201ENST00000439008 RPRMQ9NS64 109 aa9.6□□□□□ -0.87
LINC00399-201ENST00000439008 IGHV4-28A0A0C4DH34 117 aa9.59□□□□□ -0.87
LINC00399-201ENST00000439008 ZNF705FA8MVS1 300 aaPredicted RBP9.59□□□□□ -0.87
LINC00399-201ENST00000439008 MPDU1O75352 247 aa9.59□□□□□ -0.87
LINC00399-201ENST00000439008 Q6ZRG5 221 aa9.59□□□□□ -0.87
LINC00399-201ENST00000439008 FAM167A-AS1Q96KT0 104 aa9.59□□□□□ -0.87
LINC00399-201ENST00000439008 ZNF586Q9NXT0 402 aa9.59□□□□□ -0.87
LINC00399-201ENST00000439008 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 G3V3Q6 166 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 PYYP10082 97 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 S100A7P31151 101 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 CNN1P51911 297 aaKnown RBP9.58□□□□□ -0.88
LINC00399-201ENST00000439008 PSG9Q00887 426 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 PMS2P11Q13670 270 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 PSG3Q16557 428 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 RGS21Q2M5E4 152 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 BPIFA4PQ86YQ2 179 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 OR1L4Q8NGR5 311 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 ATP5SQ99766 215 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
LINC00399-201ENST00000439008 HRH4Q9H3N8 390 aa9.58□□□□□ -0.88
LINC00399-201ENST00000439008 CRXO43186 299 aaPredicted RBP9.57□□□□□ -0.88
LINC00399-201ENST00000439008 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC00399-201ENST00000439008 NDUFB4O95168 129 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
LINC00399-201ENST00000439008 TMEM41BQ5BJD5 291 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 SAMD13Q5VXD3 122 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 EBLN2Q6P2I7 272 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
LINC00399-201ENST00000439008 MIR17HGQ75NE6 70 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 ZNF738Q8NE65 137 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 PFDN5Q99471 154 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 SLC25A2Q9BXI2 301 aa9.57□□□□□ -0.88
LINC00399-201ENST00000439008 M0R2Z0 102 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 PRM2P04554 102 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 PET100P0DJ07 73 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 LCN15Q6UWW0 184 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 S100A7AQ86SG5 101 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 OR8A1Q8NGG7 326 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 ZNF503Q96F45 646 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 MFFQ9GZY8 342 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 CELA1Q9UNI1 258 aa9.56□□□□□ -0.88
LINC00399-201ENST00000439008 GIPP09681 153 aaPredicted RBP9.55□□□□□ -0.88
LINC00399-201ENST00000439008 CXCL2P19875 107 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 NUTF2P61970 127 aaKnown RBP9.55□□□□□ -0.88
LINC00399-201ENST00000439008 KIR3DS1Q14943 382 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 RPUSD4Q96CM3 377 aaKnown RBP9.55□□□□□ -0.88
LINC00399-201ENST00000439008 C1QTNF4Q9BXJ3 329 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 PARD6GQ9BYG4 376 aaPredicted RBP9.55□□□□□ -0.88
LINC00399-201ENST00000439008 TMEM14CQ9P0S9 112 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 RYR2Q92736 4967 aa9.55□□□□□ -0.88
LINC00399-201ENST00000439008 DNAH1Q9P2D7 4330 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 TRBV19A0A075B6N1 114 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 IGHV3OR16-12A0A075B7B8 117 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 LCE6AA0A183 80 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 CXorf65A6NEN9 183 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 M0R3E3 92 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 MIFP14174 115 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 HIST1H1AQ02539 215 aaPredicted RBP9.54□□□□□ -0.88
LINC00399-201ENST00000439008 BAP18Q8IXM2 172 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 LRRC20Q8TCA0 184 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 AQP10Q96PS8 301 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 SLC50A1Q9BRV3 221 aa9.54□□□□□ -0.88
LINC00399-201ENST00000439008 TRAV12-2A0A075B6T6 113 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 RNF222A6NCQ9 220 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 DUSP14O95147 198 aaKnown RBP9.53□□□□□ -0.88
LINC00399-201ENST00000439008 HIST1H1EP10412 219 aaKnown RBP9.53□□□□□ -0.88
LINC00399-201ENST00000439008 FFAR4Q5NUL3 377 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 CEMP1Q6PRD7 247 aaPredicted RBP9.53□□□□□ -0.88
LINC00399-201ENST00000439008 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 PHLDA1Q8WV24 401 aaPredicted RBP9.53□□□□□ -0.88
LINC00399-201ENST00000439008 FXYD5Q96DB9 178 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
LINC00399-201ENST00000439008 IFNA5P01569 189 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 OR10J4P0C629 311 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 ZNF767PQ75MW2 155 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 BLNKQ8WV28 456 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 IGF2BP2-AS1Q96M15 143 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 NEU1Q99519 415 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 FUT9Q9Y231 359 aa9.52□□□□□ -0.89
LINC00399-201ENST00000439008 SMLR1H3BR10 107 aa9.51□□□□□ -0.89
LINC00399-201ENST00000439008 BOLA2-SMG1P6H3BVE0 249 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms