RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 NHLH2Q02577 135 aa17.93■□□□□ 0.46
RAPGEF1-206ENST00000438647 LCN15Q6UWW0 184 aa17.93■□□□□ 0.46
RAPGEF1-206ENST00000438647 ZNF709Q8N972 641 aa17.93■□□□□ 0.46
RAPGEF1-206ENST00000438647 SLC39A9Q9NUM3 307 aa17.93■□□□□ 0.46
RAPGEF1-206ENST00000438647 MRPS12O15235 138 aaKnown RBP17.92■□□□□ 0.46
RAPGEF1-206ENST00000438647 RNF182Q8N6D2 247 aa17.92■□□□□ 0.46
RAPGEF1-206ENST00000438647 ZNF738Q8NE65 137 aa17.92■□□□□ 0.46
RAPGEF1-206ENST00000438647 CXCL3P19876 107 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 IGFL4Q6B9Z1 124 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 PHLDA1Q8WV24 401 aaPredicted RBP17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 SLC50A1Q9BRV3 221 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 NPCDR1Q9BY65 106 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 SLC35B3Q9H1N7 401 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 HRH4Q9H3N8 390 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 PXMP4Q9Y6I8 212 aa17.91■□□□□ 0.46
RAPGEF1-206ENST00000438647 RYR2Q92736 4967 aa17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 A8MTW9 85 aa17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 MPC2O95563 127 aa17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 RBMY1A1P0DJD3 496 aaKnown RBP17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 RBMY1CP0DJD4 496 aa17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 FXYD7P58549 80 aa17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 NANOS2P60321 138 aaKnown RBP17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 RBMY1FQ15415 496 aaKnown RBP17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 ZNF705AQ6ZN79 300 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF1-206ENST00000438647 CNN1P51911 297 aaKnown RBP17.89■□□□□ 0.45
RAPGEF1-206ENST00000438647 PSG3Q16557 428 aa17.89■□□□□ 0.45
RAPGEF1-206ENST00000438647 NEU1Q99519 415 aa17.89■□□□□ 0.45
RAPGEF1-206ENST00000438647 KCNIP2Q9NS61 270 aa17.89■□□□□ 0.45
RAPGEF1-206ENST00000438647 CLINT1Q14677 625 aa17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 MORN5Q5VZ52 161 aa17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 THAP6Q8TBB0 222 aa17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 ZNF331Q9NQX6 463 aaPredicted RBP17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 GOLT1BQ9Y3E0 138 aa17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 ALG5Q9Y673 324 aa17.88■□□□□ 0.45
RAPGEF1-206ENST00000438647 SMIM9A6NGZ8 99 aa17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 ZNF705FA8MVS1 300 aaPredicted RBP17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 AMBPP02760 352 aa17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 ZNF705DP0CH99 300 aaPredicted RBP17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 ZNF705BP0CI00 300 aaPredicted RBP17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 GUK1Q16774 197 aa17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 RNF126Q9BV68 326 aa17.87■□□□□ 0.45
RAPGEF1-206ENST00000438647 ALMS1Q8TCU4 4167 aa17.86■□□□□ 0.45
RAPGEF1-206ENST00000438647 IGLC2P0DOY2 106 aa17.86■□□□□ 0.45
RAPGEF1-206ENST00000438647 AMTNQ6UX39 209 aa17.86■□□□□ 0.45
RAPGEF1-206ENST00000438647 DNAH1Q9P2D7 4330 aa17.86■□□□□ 0.45
RAPGEF1-206ENST00000438647 IGHV3OR16-12A0A075B7B8 117 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 HLA-DMBP28068 263 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 OR11H7Q8NGC8 314 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 OR8A1Q8NGG7 326 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 RPUSD4Q96CM3 377 aaKnown RBP17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 ATP5SQ99766 215 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 WDR61Q9GZS3 305 aaKnown RBP17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 HSPB11Q9Y547 144 aa17.85■□□□□ 0.45
RAPGEF1-206ENST00000438647 TMEM189A5PLL7 270 aa17.84■□□□□ 0.45
RAPGEF1-206ENST00000438647 C11orf94C9JXX5 98 aa17.84■□□□□ 0.45
RAPGEF1-206ENST00000438647 HIST1H1AQ02539 215 aaPredicted RBP17.84■□□□□ 0.45
RAPGEF1-206ENST00000438647 IGF2BP2-AS1Q96M15 143 aa17.84■□□□□ 0.45
RAPGEF1-206ENST00000438647 MBD2Q9UBB5 411 aa17.84■□□□□ 0.45
RAPGEF1-206ENST00000438647 TRAV5A0A0B4J249 113 aa17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 C17orf112F2Z3M2 114 aa17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 SNRPCP09234 159 aaKnown RBP17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 RPL12P30050 165 aaKnown RBP17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 PPP1R14DQ9NXH3 145 aa17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 RFNGQ9Y644 331 aa17.83■□□□□ 0.44
RAPGEF1-206ENST00000438647 H3BQ15 152 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 RHOBP62745 196 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 SPINK13Q1W4C9 94 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 TMEM208Q9BTX3 173 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 MED28Q9H204 178 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 TMEM14CQ9P0S9 112 aa17.82■□□□□ 0.44
RAPGEF1-206ENST00000438647 H3BTX0 84 aa17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 BOLA2-SMG1P6H3BVE0 249 aa17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 ZNF253O75346 499 aa17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 INSP01308 110 aa17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 HBE1P02100 147 aa17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 SAT2Q96F10 170 aaPredicted RBP17.81■□□□□ 0.44
RAPGEF1-206ENST00000438647 M0R2Z0 102 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 SLC17A3O00476 420 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 IFNA5P01569 189 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 GCSAMLQ5JQS6 135 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 C1orf158Q8N1D5 194 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 C2CD4CQ8TF44 421 aa17.8■□□□□ 0.44
RAPGEF1-206ENST00000438647 SCGB1C1Q8TD33 95 aa17.79■□□□□ 0.44
RAPGEF1-206ENST00000438647 LINC00476Q8WZB0 136 aa17.79■□□□□ 0.44
RAPGEF1-206ENST00000438647 ZNF586Q9NXT0 402 aa17.79■□□□□ 0.44
RAPGEF1-206ENST00000438647 HIST1H1EP10412 219 aaKnown RBP17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 PDE6HQ13956 83 aa17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 RRN3P1Q2M238 152 aa17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 Q6ZTC4 211 aa17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 OR10J6PQ8NGY7 276 aa17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 MRPL32Q9BYC8 188 aaKnown RBP17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 CELA1Q9UNI1 258 aa17.78■□□□□ 0.44
RAPGEF1-206ENST00000438647 TRBV19A0A075B6N1 114 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 TRAV10A0A0B4J240 114 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 TEX48A0A1B0GUV7 120 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 SPART-AS1P0CW21 52 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 TCTAP57738 103 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 SMIM3Q9BZL3 60 aa17.77■□□□□ 0.44
RAPGEF1-206ENST00000438647 HYDINQ4G0P3 5121 aa17.76■□□□□ 0.43
RAPGEF1-206ENST00000438647 CRXO43186 299 aaPredicted RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms