RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 SFT2D2O95562 160 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 NUDT3O95989 172 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 ATP5G1P05496 136 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 LINC00869P0C866 280 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 HTN1P15515 57 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 ANXA7P20073 488 aaKnown RBP5.5□□□□□ -1.53
VPS50-203ENST00000436177 GATA2P23769 480 aaPredicted RBP5.5□□□□□ -1.53
VPS50-203ENST00000436177 ATP5G3P48201 142 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 CCL18P55774 89 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 UBE2MP61081 183 aaKnown RBP5.5□□□□□ -1.53
VPS50-203ENST00000436177 SPANXN2Q5MJ10 180 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 CYP2G1PQ6ZSU1 146 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 TMEM144Q7Z5S9 345 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 TMEM256Q8N2U0 113 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 OR11H7Q8NGC8 314 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 TRIM63Q969Q1 353 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 LINC01587Q99440 93 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 SHANK2-AS3Q9BTD1 123 aa5.5□□□□□ -1.53
VPS50-203ENST00000436177 SLIRPQ9GZT3 109 aaKnown RBP5.5□□□□□ -1.53
VPS50-203ENST00000436177 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 H3BRN7 92 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 ADAP1O75689 374 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 SCGB1D2O95969 90 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 TSPOP30536 169 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 RRAS2P62070 204 aaPredicted RBP5.49□□□□□ -1.53
VPS50-203ENST00000436177 C4orf46Q504U0 113 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 TRIQKQ629K1 86 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 IGFL4Q6B9Z1 124 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 AMTNQ6UX39 209 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 Q6ZR54 194 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 OR8A1Q8NGG7 326 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 OR10J6PQ8NGY7 276 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 SLC25A39Q9BZJ4 359 aaPredicted RBP5.49□□□□□ -1.53
VPS50-203ENST00000436177 PSENENQ9NZ42 101 aa5.49□□□□□ -1.53
VPS50-203ENST00000436177 TRAV12-2A0A075B6T6 113 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 A8MTW9 85 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 C16orf90A8MZG2 172 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 GOSR2O14653 212 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 TAS2R60P59551 318 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 POLR2GP62487 172 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS50-203ENST00000436177 DLK1P80370 383 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 TTC32Q5I0X7 151 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 LCN15Q6UWW0 184 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 ZNF546Q86UE3 836 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 OR10P1Q8NGE3 313 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 RPUSD4Q96CM3 377 aaKnown RBP5.48□□□□□ -1.53
VPS50-203ENST00000436177 C16orf74Q96GX8 76 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 UHRF2Q96PU4 802 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 SOSTQ9BQB4 213 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 ARL6Q9H0F7 186 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 TIMM8BQ9Y5J9 83 aaPredicted RBP5.48□□□□□ -1.53
VPS50-203ENST00000436177 V9GYH0 126 aa5.48□□□□□ -1.53
VPS50-203ENST00000436177 TRAV8-2A0A0B4J237 113 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 C9orf170A2RU37 121 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 CBY3A6NI87 242 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 CENPXA8MT69 81 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 PRSS46E5RG02 174 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 COX7A2P2O60397 106 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 METTL15P1P0C7V9 234 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 CXCL3P19876 107 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 CDKN1BP46527 198 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 RAB31Q13636 194 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 ZNF846Q147U1 533 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 PSG3Q16557 428 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 IAH1Q2TAA2 248 aaPredicted RBP5.47□□□□□ -1.53
VPS50-203ENST00000436177 PXDC1Q5TGL8 231 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 TEPPQ6URK8 271 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 ZNF493Q6ZR52 646 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 CCDC190Q86UF4 302 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 ZNF575Q86XF7 245 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 SLC50A1Q9BRV3 221 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 NPVFQ9HCQ7 196 aa5.47□□□□□ -1.53
VPS50-203ENST00000436177 A0A087X0K7 114 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 NBDYA0A0U1RRE5 68 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 LINC00854A0A1B0GVQ3 168 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 NAP1L6A6NFF2 107 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 SNURFLB1AK76 121 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 H7BYZ3 331 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 L7N2F9 121 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 CRXO43186 299 aaPredicted RBP5.46□□□□□ -1.54
VPS50-203ENST00000436177 NDUFB6O95139 128 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 CXCL2P19875 107 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 VAMP2P63027 116 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 SLC38A11Q08AI6 406 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 OR5I1Q13606 314 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 TMEM182Q6ZP80 229 aaPredicted RBP5.46□□□□□ -1.54
VPS50-203ENST00000436177 BPIFA4PQ86YQ2 179 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 C6orf223Q8N319 242 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 TMEM263Q8WUH6 116 aaKnown RBP5.46□□□□□ -1.54
VPS50-203ENST00000436177 GNPNAT1Q96EK6 184 aaPredicted RBP5.46□□□□□ -1.54
VPS50-203ENST00000436177 SMIM8Q96KF7 97 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 ARV1Q9H2C2 271 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 NOP10Q9NPE3 64 aaKnown RBP5.46□□□□□ -1.54
VPS50-203ENST00000436177 GSKIPQ9P0R6 139 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 PXMP4Q9Y6I8 212 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.54
VPS50-203ENST00000436177 PMS2P5A8MQ11 134 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms