RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 LINC00305Q7Z4B0 112 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 OR5H6Q8NGV6 325 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 ZNF563Q8TA94 476 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 TMEM254Q8TBM7 123 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 PYDC1Q8WXC3 89 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 OR2H1Q9GZK4 316 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 C14orf132Q9NPU4 83 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 CDC42SE1Q9NRR8 79 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 C19orf12Q9NSK7 152 aa1.02□□□□□ -2.25
PTPN4-205ENST00000433888 HEATR1Q9H583 2144 aaKnown RBP1.01□□□□□ -2.25
PTPN4-205ENST00000433888 KIAA1549Q9HCM3 1950 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 LOC107984156A0A0G2JMH3 177 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 A0A1B0GW64 132 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 C9orf170A2RU37 121 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 KPNA4O00629 521 aaPredicted RBP1.01□□□□□ -2.25
PTPN4-205ENST00000433888 PFDN1O60925 122 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 DNAL4O96015 105 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 DHFRP00374 187 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 CMPK1P30085 196 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 RPL35P42766 123 aaKnown RBP1.01□□□□□ -2.25
PTPN4-205ENST00000433888 PDE6HQ13956 83 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 OR8B8Q15620 311 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 SPRNQ5BIV9 151 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 C1orf137Q5JT78 98 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 GKN2Q86XP6 184 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 ARL17AQ8IVW1 177 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 FAM216BQ8N7L0 139 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 TMEM229BQ8NBD8 167 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 ISOC1Q96CN7 298 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 CBLN4Q9NTU7 201 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 LAMTOR2Q9Y2Q5 125 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 HSPB11Q9Y547 144 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 CACNA1GO43497 2377 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 CR1P17927 2039 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 CASP8AP2Q9UKL3 1982 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 FER1L6Q2WGJ9 1857 aa1.01□□□□□ -2.25
PTPN4-205ENST00000433888 TRAV10A0A0B4J240 114 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 LOC107984640A0A0U1RRK4 108 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 H3BMG7 143 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 IFNA4P05014 189 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 OR10J4P0C629 311 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 ZNF25P17030 456 aaPredicted RBP1□□□□□ -2.25
PTPN4-205ENST00000433888 RAB5CP51148 216 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 FOXA3P55318 350 aaPredicted RBP1□□□□□ -2.25
PTPN4-205ENST00000433888 VMA21Q3ZAQ7 101 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 RPS19BP1Q86WX3 136 aaKnown RBP1□□□□□ -2.25
PTPN4-205ENST00000433888 OR9Q1Q8NGQ5 310 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 SKA2Q8WVK7 121 aaPredicted RBP1□□□□□ -2.25
PTPN4-205ENST00000433888 HYLS1Q96M11 299 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 AIF1LQ9BQI0 150 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 GSKIPQ9P0R6 139 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 KLK9Q9UKQ9 250 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 CHCHD2Q9Y6H1 151 aaPredicted RBP1□□□□□ -2.25
PTPN4-205ENST00000433888 PLXNA4Q9HCM2 1894 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 LAMB2P55268 1798 aa1□□□□□ -2.25
PTPN4-205ENST00000433888 EXPH5Q8NEV8 1989 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 CAMSAP2Q08AD1 1489 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 BCL9O00512 1426 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 ARHGEF10O15013 1369 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 LAMB4A4D0S4 1761 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 ARFGEF3Q5TH69 2177 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 TRAV13-1A0A0B4J241 112 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 IGHV1-58A0A0C4DH39 117 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 hDV103S1A0JD37 113 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 ZNF736B4DX44 427 aaPredicted RBP0.99□□□□□ -2.25
PTPN4-205ENST00000433888 C5orf58C9J3I9 102 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 J3KT08 172 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 DEGS1O15121 323 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 CRYGSP22914 178 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 NDUFA6P56556 154 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 ALX1Q15699 326 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 PHF5AQ7RTV0 110 aaKnown RBP0.99□□□□□ -2.25
PTPN4-205ENST00000433888 LRRC18Q8N456 261 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 C12orf29Q8N999 325 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 MAFIPQ8WZ33 124 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 PRELID3AQ96N28 172 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 NAA38Q9BRA0 125 aaKnown RBP0.99□□□□□ -2.25
PTPN4-205ENST00000433888 LXNQ9BS40 222 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 LAMTOR3Q9UHA4 124 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 TNRC6AQ8NDV7 1962 aaKnown RBP0.99□□□□□ -2.25
PTPN4-205ENST00000433888 BRWD1Q9NSI6 2320 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 PTPRFP10586 1907 aa0.99□□□□□ -2.25
PTPN4-205ENST00000433888 DIDO1Q9BTC0 2240 aaKnown RBP0.99□□□□□ -2.25
PTPN4-205ENST00000433888 TRAV27A0A087WT01 109 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 ARL5CA6NH57 179 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 C17orf112F2Z3M2 114 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 HYPMO75409 117 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 ERC2-IT1O76042 136 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 PRB4P10163 310 aaPredicted RBP0.98□□□□□ -2.25
PTPN4-205ENST00000433888 CKS1BP61024 79 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 TMEM244Q5VVB8 128 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 TOMM20LQ6UXN7 152 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.98□□□□□ -2.25
PTPN4-205ENST00000433888 LZICQ8WZA0 190 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 CLEC2BQ92478 149 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 BORCS5Q969J3 196 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 MUCL1Q96DR8 90 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 TCEAL2Q9H3H9 227 aaPredicted RBP0.98□□□□□ -2.25
PTPN4-205ENST00000433888 RASL12Q9NYN1 266 aa0.98□□□□□ -2.25
PTPN4-205ENST00000433888 JPT1Q9UK76 154 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms