RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 KLHDC3Q9BQ90 382 aa3.04□□□□□ -1.92
SHPRH-205ENST00000433355 TEX15Q9BXT5 2789 aa3.04□□□□□ -1.92
SHPRH-205ENST00000433355 SHISA8B8ZZ34 492 aa3.04□□□□□ -1.92
SHPRH-205ENST00000433355 LOXL1Q08397 574 aaPredicted RBP3.04□□□□□ -1.92
SHPRH-205ENST00000433355 LCNL1Q6ZST4 164 aa3.04□□□□□ -1.92
SHPRH-205ENST00000433355 PATE3B3GLJ2 98 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 H3BRN7 92 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 CKS2P33552 79 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 KLF17Q5JT82 389 aaPredicted RBP3.03□□□□□ -1.92
SHPRH-205ENST00000433355 IGHV4-4A0A075B6R2 117 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 LINC00473A8K010 186 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 INAFM2P0DMQ5 153 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 GP9P14770 177 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TFF2Q03403 129 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TPTE2P1Q5T6R2 138 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TRAV41A0A0B4J266 112 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TMEM50AO95807 157 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 PLPPR2Q96GM1 343 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 C5orf30Q96GV9 206 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 A8MWV9 139 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 PRSS57Q6UWY2 283 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 C11orf53Q8IXP5 236 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 IFI27L1Q96BM0 104 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.03□□□□□ -1.92
SHPRH-205ENST00000433355 PRSS47A8MTI9 375 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 RPL13AP40429 203 aaKnown RBP3.03□□□□□ -1.92
SHPRH-205ENST00000433355 SLAQ13239 276 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TGIF1Q15583 401 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 LTC4SQ16873 150 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TMEM136Q6ZRR5 245 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 MYOZ3Q8TDC0 251 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 A0A1W2PPE3 182 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 H7C423 109 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 GPR183P32249 361 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TM4SF20Q53R12 229 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 RPL39P5Q59GN2 51 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 FER1L6-AS1Q8NA97 138 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 LIME1Q9H400 295 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 HIVEP1P15822 2718 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 NKX2-8O15522 239 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 C16orf47Q6ZP98 133 aaPredicted RBP3.03□□□□□ -1.92
SHPRH-205ENST00000433355 GATD1Q8NB37 220 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 CHAC1Q9BUX1 264 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 HES7Q9BYE0 225 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 COL27A1Q8IZC6 1860 aaPredicted RBP3.03□□□□□ -1.92
SHPRH-205ENST00000433355 CELA2AP08217 269 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 SCGB1A1P11684 91 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 ADCYAP1P18509 176 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 CARD19Q96LW7 228 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 TP53TG3Q9ULZ0 132 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 RNF114Q9Y508 228 aa3.03□□□□□ -1.92
SHPRH-205ENST00000433355 INSP01308 110 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 IGLC1P0CG04 106 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 NIT1Q86X76 327 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 FAM216BQ8N7L0 139 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 C11orf44Q8N8P7 122 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 ZNF775Q96BV0 537 aaPredicted RBP3.03□□□□□ -1.93
SHPRH-205ENST00000433355 ZNF837Q96EG3 531 aaPredicted RBP3.03□□□□□ -1.93
SHPRH-205ENST00000433355 MCRIP2Q9BUT9 160 aaKnown RBP3.03□□□□□ -1.93
SHPRH-205ENST00000433355 DPH3P1Q9H4G8 78 aa3.03□□□□□ -1.93
SHPRH-205ENST00000433355 ATP5J2P56134 94 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 BATFQ16520 125 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 LY6G5BQ8NDX9 201 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 PLEKHB2Q96CS7 222 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 TBX15Q96SF7 602 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 C20orf24Q9BUV8 137 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 A0A1W2PRD5 423 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 A0A1W2PRF3 423 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 A0A1W2PRM7 423 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 AGFG2O95081 481 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 C16orf92Q96LL3 132 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 PLAUP00749 431 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 CELA3AP09093 270 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 AZU1P20160 251 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 INSL3P51460 131 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 LAGE3Q14657 143 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 C15orf32Q32M92 178 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 PYY3Q5JQD4 70 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 V9GYV3 84 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 ZNF329Q86UD4 541 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 ZNRF1Q8ND25 227 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 OR8A1Q8NGG7 326 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 ATP6V0E2Q8NHE4 81 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 DNAJC30Q96LL9 226 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 LGALS9O00182 355 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 NCR2O95944 276 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 IGF1P05019 195 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 FCER1GP30273 86 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 CDKN1AP38936 164 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 FAM104BQ5XKR9 115 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 SP5Q6BEB4 398 aaPredicted RBP3.02□□□□□ -1.93
SHPRH-205ENST00000433355 AMMECR1LQ6DCA0 310 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 MORN3Q6PF18 240 aaPredicted RBP3.02□□□□□ -1.93
SHPRH-205ENST00000433355 CCL19Q99731 98 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 SH2D7A6NKC9 451 aaPredicted RBP3.02□□□□□ -1.93
SHPRH-205ENST00000433355 PF4P02776 101 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 UNQ5815/PRO19632Q6UWF5 114 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 TIMM17AQ99595 171 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 GTSF1LQ9H1H1 148 aa3.02□□□□□ -1.93
SHPRH-205ENST00000433355 SPAARA0A1B0GVQ0 90 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms