RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 MT-ND6P03923 174 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 IGHV4-38-2P0DP08 117 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 HLA-DMBP28068 263 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 BRS3P32247 399 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 RHOGP84095 191 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 C1RLQ9NZP8 487 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 SMAD5-AS1Q9Y6J3 95 aa11.41□□□□□ -0.58
RFTN1-203ENST00000432519 P01737 135 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 HLA-DQA1P01909 254 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 PAX1P15863 534 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 CRIP1P50238 77 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 PGLYRP4Q96LB8 373 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 THYN1Q9P016 225 aa11.4□□□□□ -0.58
RFTN1-203ENST00000432519 NBPF19A0A087WUL8 3843 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF253O75346 499 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 CLEC3BP05452 202 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 TDRG1Q3Y452 100 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 DNLZQ5SXM8 178 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 C5orf56Q8N8D9 126 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 C10orf105Q8TEF2 133 aa11.4□□□□□ -0.59
RFTN1-203ENST00000432519 A0A1B0GXF2 115 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 SCGB1D1O95968 90 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 ESDP10768 282 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 OR2D3Q8NGH3 330 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 FAM110DQ8TAY7 271 aaPredicted RBP11.39□□□□□ -0.59
RFTN1-203ENST00000432519 CCDC140Q96MF4 163 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV3OR16-13A0A075B7E8 117 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV3-74A0A0B4J1X5 117 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV3-66A0A0C4DH42 116 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 ATP5J2P56134 94 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF502Q8TBZ5 544 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 WIPF2Q8TF74 440 aaPredicted RBP11.39□□□□□ -0.59
RFTN1-203ENST00000432519 SMIM12Q96EX1 92 aa11.39□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF469Q96JG9 3925 aaPredicted RBP11.38□□□□□ -0.59
RFTN1-203ENST00000432519 COL8A1P27658 744 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 BBC3Q96PG8 261 aaPredicted RBP11.38□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF492Q9P255 531 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 PSG8Q9UQ74 426 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 A0A1W2PS18 150 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 NPIPB6E9PJ23 425 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 IGHG4P01861 327 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 PKIAP61925 76 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 TOMM20LQ6UXN7 152 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 C18orf32Q8TCD1 76 aa11.38□□□□□ -0.59
RFTN1-203ENST00000432519 POLR3KQ9Y2Y1 108 aaPredicted RBP11.38□□□□□ -0.59
RFTN1-203ENST00000432519 UBR5O95071 2799 aaPredicted RBP11.38□□□□□ -0.59
RFTN1-203ENST00000432519 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
RFTN1-203ENST00000432519 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
RFTN1-203ENST00000432519 PSG3Q16557 428 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 CLEC19AQ6UXS0 136 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 PIMREGQ9BSJ6 248 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV3-49A0A0A0MS15 119 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF705FA8MVS1 300 aaPredicted RBP11.37□□□□□ -0.59
RFTN1-203ENST00000432519 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 DDTP30046 118 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 DAZAP1Q96EP5 407 aaKnown RBP11.37□□□□□ -0.59
RFTN1-203ENST00000432519 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 SAMD10Q9BYL1 202 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 MXRA5Q9NR99 2828 aa11.37□□□□□ -0.59
RFTN1-203ENST00000432519 APOHP02749 345 aaPredicted RBP11.36□□□□□ -0.59
RFTN1-203ENST00000432519 GPX1P07203 203 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 PMCHP20382 165 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 TPPP2P59282 170 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 TMEM75Q8N9X5 138 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 ZFAND3Q9H8U3 227 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 A8MWL6 223 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
RFTN1-203ENST00000432519 AVPP01185 164 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 LY6EQ16553 131 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 NAGKQ9UJ70 344 aa11.36□□□□□ -0.59
RFTN1-203ENST00000432519 CLPSL1A2RUU4 121 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 M0QZ24 198 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
RFTN1-203ENST00000432519 OR10J3Q5JRS4 329 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 Q8TAT8 98 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 RABAC1Q9UI14 185 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 COX19Q49B96 90 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 C16orf54Q6UWD8 224 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 Q6ZS46 218 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 LYPD1Q8N2G4 141 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 VN1R17PQ8TDU5 208 aa11.35□□□□□ -0.59
RFTN1-203ENST00000432519 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
RFTN1-203ENST00000432519 A8MWP6 167 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 TSTD3H0UI37 97 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 AMTP48728 403 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 PAFAH1B2P68402 229 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 CT83Q5H943 113 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 SSTP61278 116 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 HBBP68871 147 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 CLEC2AQ6UVW9 174 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 KCNS1Q96KK3 526 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 VGLL1Q99990 258 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 RNF24Q9Y225 148 aa11.34□□□□□ -0.59
RFTN1-203ENST00000432519 PDE6HQ13956 83 aa11.33□□□□□ -0.59
RFTN1-203ENST00000432519 RBPMS2Q6ZRY4 209 aaKnown RBP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms