RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 PFDN5Q99471 154 aa7.11□□□□□ -1.27
HDAC6-207ENST00000430858 NEU1Q99519 415 aa7.11□□□□□ -1.27
HDAC6-207ENST00000430858 SLC39A9Q9NUM3 307 aa7.11□□□□□ -1.27
HDAC6-207ENST00000430858 OR5AC2Q9NZP5 309 aa7.11□□□□□ -1.27
HDAC6-207ENST00000430858 SMIM9A6NGZ8 99 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 H0YIZ8 118 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 CXCL3P19876 107 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 FGF7P21781 194 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 FXYD7P58549 80 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 NANOS2P60321 138 aaKnown RBP7.1□□□□□ -1.27
HDAC6-207ENST00000430858 NHLH2Q02577 135 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 OPCMLQ14982 345 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 LCN15Q6UWW0 184 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 RNF182Q8N6D2 247 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 ZNF738Q8NE65 137 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 OR5C1Q8NGR4 320 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 SLC50A1Q9BRV3 221 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 SLC35B3Q9H1N7 401 aa7.1□□□□□ -1.27
HDAC6-207ENST00000430858 RYR3Q15413 4870 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 ZNF705FA8MVS1 300 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-207ENST00000430858 MPC2O95563 127 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 PTTG1O95997 202 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 AMBPP02760 352 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 ZNF705DP0CH99 300 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-207ENST00000430858 ZNF705BP0CI00 300 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-207ENST00000430858 CNN1P51911 297 aaKnown RBP7.09□□□□□ -1.27
HDAC6-207ENST00000430858 PSG3Q16557 428 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 MORN5Q5VZ52 161 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 RNF126Q9BV68 326 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 NPCDR1Q9BY65 106 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 ZNF331Q9NQX6 463 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-207ENST00000430858 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 PXMP4Q9Y6I8 212 aa7.09□□□□□ -1.27
HDAC6-207ENST00000430858 TMEM189A5PLL7 270 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 C11orf94C9JXX5 98 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 IGLC2P0DOY2 106 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 CLINT1Q14677 625 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 GUK1Q16774 197 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 AMTNQ6UX39 209 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 OR11H7Q8NGC8 314 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 THAP6Q8TBB0 222 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 KCNIP2Q9NS61 270 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 TENM2Q9NT68 2774 aa7.08□□□□□ -1.28
HDAC6-207ENST00000430858 IGHV3OR16-12A0A075B7B8 117 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 TRAV5A0A0B4J249 113 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 ZNF253O75346 499 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 HLA-DMBP28068 263 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 HIST1H1AQ02539 215 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-207ENST00000430858 C1orf158Q8N1D5 194 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 LINC00476Q8WZB0 136 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 RPUSD4Q96CM3 377 aaKnown RBP7.07□□□□□ -1.28
HDAC6-207ENST00000430858 SAT2Q96F10 170 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-207ENST00000430858 IGF2BP2-AS1Q96M15 143 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 WDR61Q9GZS3 305 aaKnown RBP7.07□□□□□ -1.28
HDAC6-207ENST00000430858 RFNGQ9Y644 331 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 ALG5Q9Y673 324 aa7.07□□□□□ -1.28
HDAC6-207ENST00000430858 C17orf112F2Z3M2 114 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 H3BQ15 152 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 INSP01308 110 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 HBE1P02100 147 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 SNRPCP09234 159 aaKnown RBP7.06□□□□□ -1.28
HDAC6-207ENST00000430858 RPL12P30050 165 aaKnown RBP7.06□□□□□ -1.28
HDAC6-207ENST00000430858 TCTAP57738 103 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 RHOBP62745 196 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 SPINK13Q1W4C9 94 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 C2CD4CQ8TF44 421 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 ATP5SQ99766 215 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 PPP1R14DQ9NXH3 145 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 TMEM14CQ9P0S9 112 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 MBD2Q9UBB5 411 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 HSPB11Q9Y547 144 aa7.06□□□□□ -1.28
HDAC6-207ENST00000430858 DYNC2H1Q8NCM8 4307 aaKnown RBP7.05□□□□□ -1.28
HDAC6-207ENST00000430858 SACSQ9NZJ4 4579 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 TRAV10A0A0B4J240 114 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 TEX48A0A1B0GUV7 120 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 H3BTX0 84 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 BOLA2-SMG1P6H3BVE0 249 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 M0R2Z0 102 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 SLC17A3O00476 420 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 CRXO43186 299 aaPredicted RBP7.05□□□□□ -1.28
HDAC6-207ENST00000430858 LY6G6CO95867 125 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 SPART-AS1P0CW21 52 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 HIST1H1EP10412 219 aaKnown RBP7.05□□□□□ -1.28
HDAC6-207ENST00000430858 RRN3P1Q2M238 152 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 GCSAMLQ5JQS6 135 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 Q6ZTC4 211 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 OR10J6PQ8NGY7 276 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 TMEM208Q9BTX3 173 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 CELA1Q9UNI1 258 aa7.05□□□□□ -1.28
HDAC6-207ENST00000430858 TRBV19A0A075B6N1 114 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 LOC102723971A0A1B0GUV8 181 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 IFNA5P01569 189 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 CDKN1BP46527 198 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 EMP1P54849 157 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 PDE6HQ13956 83 aa7.04□□□□□ -1.28
HDAC6-207ENST00000430858 C12orf74Q32Q52 190 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms