RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 C2orf50Q96LR7 162 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 PFDN5Q99471 154 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 SLC50A1Q9BRV3 221 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 NIPSNAP3BQ9BS92 247 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 SLC35B3Q9H1N7 401 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 ARV1Q9H2C2 271 aa6.57□□□□□ -1.36
HDAC9-211ENST00000430454 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
HDAC9-211ENST00000430454 LOC102723971A0A1B0GUV8 181 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 C7orf66A4D0T2 115 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 PMS2P5A8MQ11 134 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 AGPAT2O15120 278 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 PLA2G10O15496 165 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 RLN2P04090 185 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 BTF3P20290 206 aaKnown RBP6.56□□□□□ -1.36
HDAC9-211ENST00000430454 TSPOP30536 169 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 S100A11P31949 105 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 CAMLGP49069 296 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 CNN1P51911 297 aaKnown RBP6.56□□□□□ -1.36
HDAC9-211ENST00000430454 SLC38A11Q08AI6 406 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 GUK1Q16774 197 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 ATP6V1FQ16864 119 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 C10orf113Q5VZT2 155 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 TMEM182Q6ZP80 229 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-211ENST00000430454 LINC00305Q7Z4B0 112 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 UQCC1Q9NVA1 299 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 RCL1Q9Y2P8 373 aaKnown RBP6.56□□□□□ -1.36
HDAC9-211ENST00000430454 PXMP4Q9Y6I8 212 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 AGRNO00468 2067 aa6.56□□□□□ -1.36
HDAC9-211ENST00000430454 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 A8MTW9 85 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 F6UB75 175 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 MPDU1O75352 247 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 SULT1A1P50225 295 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 DEFB1P60022 68 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 S100A10P60903 97 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 DAD1P61803 113 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 HIST1H1AQ02539 215 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-211ENST00000430454 PSG3Q16557 428 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 RPP25LQ8N5L8 163 aaKnown RBP6.55□□□□□ -1.36
HDAC9-211ENST00000430454 OR8A1Q8NGG7 326 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 OR10J6PQ8NGY7 276 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 ENKURQ8TC29 256 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 C20orf173Q96LM9 149 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 UHRF2Q96PU4 802 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 DNAJC4Q9NNZ3 241 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 CELA1Q9UNI1 258 aa6.55□□□□□ -1.36
HDAC9-211ENST00000430454 TRAV8-2A0A0B4J237 113 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 CXCL3P19876 107 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 CYCSP99999 105 aaKnown RBP6.54□□□□□ -1.36
HDAC9-211ENST00000430454 ASAH1Q13510 395 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 ZNF767PQ75MW2 155 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 RNF182Q8N6D2 247 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 POM121L12Q8N7R1 296 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 OR11H7Q8NGC8 314 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 RPUSD4Q96CM3 377 aaKnown RBP6.54□□□□□ -1.36
HDAC9-211ENST00000430454 LINC01587Q99440 93 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 C20orf144Q9BQM9 153 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 SLC25A31Q9H0C2 315 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 KCNIP2Q9NS61 270 aa6.54□□□□□ -1.36
HDAC9-211ENST00000430454 LYRM2Q9NU23 88 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-211ENST00000430454 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
HDAC9-211ENST00000430454 CCSO14618 274 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 PRAF2O60831 178 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 CCNKO75909 580 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 CST7O76096 145 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 HTN3P15516 51 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 CDKN1BP46527 198 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 TAS2R60P59551 318 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 BAXQ07812 192 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 SPINK13Q1W4C9 94 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 IGFL4Q6B9Z1 124 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 AMTNQ6UX39 209 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 PATE2Q6UY27 113 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 ZNF493Q6ZR52 646 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 LINC00336Q6ZUF6 198 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 NRARPQ7Z6K4 114 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 C1orf158Q8N1D5 194 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 MGST2Q99735 147 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 SEC22CQ9BRL7 303 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 WDR83OSQ9Y284 106 aa6.53□□□□□ -1.36
HDAC9-211ENST00000430454 VPS13DQ5THJ4 4388 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 UBE2L5PA0A1B0GUS4 154 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 FAM24AA6NFZ4 105 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 H7BYZ3 331 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 M0R2Z0 102 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 RPL29P47914 159 aaKnown RBP6.52□□□□□ -1.37
HDAC9-211ENST00000430454 DEFA1P59665 94 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 DEFA3P59666 94 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 ARL16Q0P5N6 197 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 VWC2Q2TAL6 325 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 RNF212Q495C1 297 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 ANKRD39Q53RE8 183 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 SOHLH1Q5JUK2 328 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 C15orf53Q8NAA6 179 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 C16orf74Q96GX8 76 aa6.52□□□□□ -1.37
HDAC9-211ENST00000430454 ZNF331Q9NQX6 463 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms