RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 IGLL5B9A064 214 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 INMT-MINDY4F8WBC2 141 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 MRPS12O15235 138 aaKnown RBP6.81□□□□□ -1.32
TRIM39-208ENST00000428555 PRB4P10163 310 aaPredicted RBP6.81□□□□□ -1.32
TRIM39-208ENST00000428555 S100A11P31949 105 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 CAMLGP49069 296 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 EMP1P54849 157 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 C12orf74Q32Q52 190 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 PXDC1Q5TGL8 231 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 AMTNQ6UX39 209 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 Q6ZTC4 211 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 LINC00305Q7Z4B0 112 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 S100A7AQ86SG5 101 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 ZNF546Q86UE3 836 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 C1orf158Q8N1D5 194 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 TMEM252Q8N6L7 170 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 LRRC20Q8TCA0 184 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 NEU1Q99519 415 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 GPN1Q9HCN4 374 aaPredicted RBP6.81□□□□□ -1.32
TRIM39-208ENST00000428555 DNAJC4Q9NNZ3 241 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 LYRM2Q9NU23 88 aaPredicted RBP6.81□□□□□ -1.32
TRIM39-208ENST00000428555 UQCC1Q9NVA1 299 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 CELA1Q9UNI1 258 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 DNAH10Q8IVF4 4471 aa6.81□□□□□ -1.32
TRIM39-208ENST00000428555 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 C11orf94C9JXX5 98 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 COX7A2P2O60397 106 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 DUSP14O95147 198 aaKnown RBP6.8□□□□□ -1.32
TRIM39-208ENST00000428555 CXCL3P19876 107 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 SULT1A1P50225 295 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 CNN1P51911 297 aaKnown RBP6.8□□□□□ -1.32
TRIM39-208ENST00000428555 RAB31Q13636 194 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 PSG3Q16557 428 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 MORN5Q5VZ52 161 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 C10orf113Q5VZT2 155 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 MIC13Q5XKP0 118 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 Q6ZRG5 221 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 ZNF738Q8NE65 137 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 PLA2G2EQ9NZK7 142 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 APLNQ9ULZ1 77 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 WDR83OSQ9Y284 106 aa6.8□□□□□ -1.32
TRIM39-208ENST00000428555 A0A087X0K7 114 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 TRAV5A0A0B4J249 113 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 A8MTW9 85 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 H3BTX0 84 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 M0R2Z0 102 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 RLN2P04090 185 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRM2P04554 102 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRR20EP86478 221 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRR20CP86479 221 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRR20DP86480 221 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRR20BP86481 221 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 PRR20AP86496 221 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 NHLH2Q02577 135 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 OPCMLQ14982 345 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 ATP6V1FQ16864 119 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 VWC2Q2TAL6 325 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 LGALS9CQ6DKI2 356 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 OR11H7Q8NGC8 314 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 IGF2BP2-AS1Q96M15 143 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 SPXQ9BT56 116 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 RNF24Q9Y225 148 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 GOLT1BQ9Y3E0 138 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 RFNGQ9Y644 331 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 BIRC6Q9NR09 4857 aa6.79□□□□□ -1.32
TRIM39-208ENST00000428555 KMT2AQ03164 3969 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 DEFB131BA0A096LNP1 70 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 UBE2L5PA0A1B0GUS4 154 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 H0YIZ8 118 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 H3BQ15 152 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 CRXO43186 299 aaPredicted RBP6.78□□□□□ -1.32
TRIM39-208ENST00000428555 PRAF2O60831 178 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 SPART-AS1P0CW21 52 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 RPL29P47914 159 aaKnown RBP6.78□□□□□ -1.32
TRIM39-208ENST00000428555 RHOBP62745 196 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 HBG1P69891 147 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 HBG2P69892 147 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 HIST1H1AQ02539 215 aaPredicted RBP6.78□□□□□ -1.32
TRIM39-208ENST00000428555 BAXQ07812 192 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 SPINK13Q1W4C9 94 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 STX12Q86Y82 276 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 BPIFA4PQ86YQ2 179 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 RPP25LQ8N5L8 163 aaKnown RBP6.78□□□□□ -1.32
TRIM39-208ENST00000428555 OR8A1Q8NGG7 326 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 RPUSD4Q96CM3 377 aaKnown RBP6.78□□□□□ -1.32
TRIM39-208ENST00000428555 MARVELD1Q9BSK0 173 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 TMEM208Q9BTX3 173 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 BATF3Q9NR55 127 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 SLC39A9Q9NUM3 307 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 OR5AC2Q9NZP5 309 aa6.78□□□□□ -1.32
TRIM39-208ENST00000428555 TRAV12-2A0A075B6T6 113 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 LOC102723971A0A1B0GUV8 181 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 TMEM189A5PLL7 270 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 ZNF705GA8MUZ8 300 aaPredicted RBP6.77□□□□□ -1.33
TRIM39-208ENST00000428555 PRAC2D3DTV9 90 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 E5RGE8 158 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 HBE1P02100 147 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 AMBPP02760 352 aa6.77□□□□□ -1.33
TRIM39-208ENST00000428555 S100A9P06702 114 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms