RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 OR1L4Q8NGR5 311 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 OR2G3Q8NGZ4 309 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 DCANP1Q8TF63 244 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 GATAD1Q8WUU5 269 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF503Q96F45 646 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 GRAMD2BQ96HH9 432 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 NARS2Q96I59 477 aaKnown RBP4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 FAM167A-AS1Q96KT0 104 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 HYLS1Q96M11 299 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 SPAG8Q99932 426 aaPredicted RBP4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF471Q9BX82 626 aaPredicted RBP4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC25A2Q9BXI2 301 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 TMEM231Q9H6L2 316 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 FUT9Q9Y231 359 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 TIMM9Q9Y5J7 89 aa4.25□□□□□ -1.73
HERPUD2-204ENST00000426180 TRAV8-2A0A0B4J237 113 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 KANTRA0A1W2PQU2 76 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 HELTA6NFD8 242 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 DNASE2O00115 360 aaPredicted RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC17A3O00476 420 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 HMGB3O15347 200 aaKnown RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 JTBO76095 146 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF688P0C7X2 276 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 SPP1P10451 314 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 M6PRP20645 277 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 HLA-DMBP28068 263 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 BMI1P35226 326 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 GALR1P47211 349 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF726P1Q15940 193 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 ACOT6Q3I5F7 207 aaPredicted RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 FAM78BQ5VT40 261 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 APRG1Q8IVJ8 170 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 RPP25LQ8N5L8 163 aaKnown RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 OR10G4Q8NGN3 311 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 OR10G9Q8NGN4 311 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 OR10G7Q8NGN6 311 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 GNPNAT1Q96EK6 184 aaPredicted RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 PFDN5Q99471 154 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 MAP6D1Q9H9H5 199 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 NRN1Q9NPD7 142 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 KCNIP2Q9NS61 270 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 RPRMQ9NS64 109 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 PFDN2Q9UHV9 154 aa4.24□□□□□ -1.73
HERPUD2-204ENST00000426180 A0A087X0K7 114 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 TRAV2A0A0B4J234 112 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 OR4C46A6NHA9 309 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 KNCNA6PVL3 124 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 OR11H12B2RN74 326 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 CD5P06127 495 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 OR10J4P0C629 311 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 IGLC2P0DOY2 106 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 IGHV4-30-4P0DP06 118 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 RPL7P18124 248 aaKnown RBP4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 ATF4P18848 351 aaPredicted RBP4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 FHITP49789 147 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 DEFB131AP59861 70 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 RHOBP62745 196 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 SERF2P84101 59 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 TMEM41BQ5BJD5 291 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 PSMG4Q5JS54 123 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 BPIFA4PQ86YQ2 179 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 BAP18Q8IXM2 172 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 RNF182Q8N6D2 247 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 STOML3Q8TAV4 291 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 TMED6Q8WW62 240 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 FXYD5Q96DB9 178 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 GPR82Q96P67 336 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 MRPL32Q9BYC8 188 aaKnown RBP4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF586Q9NXT0 402 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 TMEM14CQ9P0S9 112 aa4.23□□□□□ -1.73
HERPUD2-204ENST00000426180 TRBV19A0A075B6N1 114 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 RBMY1BA6NDE4 496 aaKnown RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 RBMY1EA6NEQ0 496 aaKnown RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 ZNF705FA8MVS1 300 aaPredicted RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 F6UB75 175 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 NDUFB4O95168 129 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 RBMY1DP0C7P1 496 aaKnown RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 SEC11BP0C7V7 166 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 TPT1P13693 172 aaKnown RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 CDC34P49427 236 aaPredicted RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 FGF8P55075 233 aaPredicted RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 PAFAH1B2P68402 229 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 DEFB121Q5J5C9 76 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 GDF5OSQ5U4N7 250 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 S100A7AQ86SG5 101 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 GTSCR1Q86UQ5 136 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 SLC51BQ86UW2 128 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 MRAPQ8TCY5 172 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 BLNKQ8WV28 456 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 RAB24Q969Q5 203 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 SAT2Q96F10 170 aaPredicted RBP4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 PHYHIPLQ96FC7 376 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 C16orf92Q96LL3 132 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 LINC00052Q96N35 136 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 OR51M1Q9H341 326 aa4.22□□□□□ -1.73
HERPUD2-204ENST00000426180 SRD5A3Q9H8P0 318 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms