RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
SMARCAL1-205ENST00000425815 DNAJC4Q9NNZ3 241 aa13.15□□□□□ -0.3
SMARCAL1-205ENST00000425815 IGHV3OR16-12A0A075B7B8 117 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 SMIM9A6NGZ8 99 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 CRXO43186 299 aaPredicted RBP13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 COX7A2P2O60397 106 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 PRAF2O60831 178 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 RPL29P47914 159 aaKnown RBP13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 NHLH2Q02577 135 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 PSG3Q16557 428 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 NMES1Q9C002 83 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 OR5AC2Q9NZP5 309 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
SMARCAL1-205ENST00000425815 BIRC6Q9NR09 4857 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 UBE2L5PA0A1B0GUS4 154 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 H2BFSP57053 126 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 RAB31Q13636 194 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 ATP6V1FQ16864 119 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 ZNF738Q8NE65 137 aa13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
SMARCAL1-205ENST00000425815 IGLL5B9A064 214 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 H3BQ15 152 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 IGLC2P0DOY2 106 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 Q6ZRG5 221 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 STX12Q86Y82 276 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 OR8A1Q8NGG7 326 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 SAT2Q96F10 170 aaPredicted RBP13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 IGF2BP2-AS1Q96M15 143 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 RNF126Q9BV68 326 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 SLC39A9Q9NUM3 307 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 RNF24Q9Y225 148 aa13.12□□□□□ -0.31
SMARCAL1-205ENST00000425815 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 H3BTX0 84 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 M0R2Z0 102 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 SLC17A3O00476 420 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 PRM2P04554 102 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 CXCL2P19875 107 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 B2MP61769 119 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 HBG1P69891 147 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 HBG2P69892 147 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 BAXQ07812 192 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 SPINK13Q1W4C9 94 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 BPIFA4PQ86YQ2 179 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 PLA2G2EQ9NZK7 142 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 GOLT1BQ9Y3E0 138 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 RFNGQ9Y644 331 aa13.11□□□□□ -0.31
SMARCAL1-205ENST00000425815 E5RGE8 158 aa13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 FGF7P21781 194 aa13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 EMP1P54849 157 aa13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 RPP25LQ8N5L8 163 aaKnown RBP13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 OR1L4Q8NGR5 311 aa13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 LRRC20Q8TCA0 184 aa13.1□□□□□ -0.31
SMARCAL1-205ENST00000425815 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 PRAC2D3DTV9 90 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 RLN2P04090 185 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 TCTAP57738 103 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 DEFA1P59665 94 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 DEFA3P59666 94 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 HIST1H1AQ02539 215 aaPredicted RBP13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 LCN15Q6UWW0 184 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 RPUSD4Q96CM3 377 aaKnown RBP13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 DKK2Q9UBU2 259 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 PXMP4Q9Y6I8 212 aa13.09□□□□□ -0.31
SMARCAL1-205ENST00000425815 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 TRAV12-2A0A075B6T6 113 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 AMBPP02760 352 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 CYCSP99999 105 aaKnown RBP13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 OR5C1Q8NGR4 320 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 THAP6Q8TBB0 222 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 SLC50A1Q9BRV3 221 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 NPCDR1Q9BY65 106 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 SLC25A31Q9H0C2 315 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 ZNF586Q9NXT0 402 aa13.08□□□□□ -0.32
SMARCAL1-205ENST00000425815 DEFB131BA0A096LNP1 70 aa13.07□□□□□ -0.32
SMARCAL1-205ENST00000425815 HBE1P02100 147 aa13.07□□□□□ -0.32
SMARCAL1-205ENST00000425815 FAM222AQ5U5X8 452 aa13.07□□□□□ -0.32
SMARCAL1-205ENST00000425815 PFDN5Q99471 154 aa13.07□□□□□ -0.32
SMARCAL1-205ENST00000425815 IGHV4-4A0A075B6R2 117 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 LOC102723971A0A1B0GUV8 181 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 ZNF705GA8MUZ8 300 aaPredicted RBP13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 BOLA2-SMG1P6H3BVE0 249 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 MPDU1O75352 247 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 RHOBP62745 196 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 RRN3P1Q2M238 152 aa13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 YTHDF2Q9Y5A9 579 aaKnown RBP13.06□□□□□ -0.32
SMARCAL1-205ENST00000425815 SSNA1O43805 119 aa13.05□□□□□ -0.32
SMARCAL1-205ENST00000425815 MPC2O95563 127 aa13.05□□□□□ -0.32
SMARCAL1-205ENST00000425815 INSP01308 110 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms