RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 CREBBPQ92793 2442 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 A0A087X0K7 114 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 TGIF2-C20orf24A0A0A6YYL0 155 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 ZNF785A8K8V0 405 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 IGHG4P01861 327 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 TYMSP04818 313 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 BLCAPP62952 87 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 IBA57Q5T440 356 aaKnown RBP7.33□□□□□ -1.24
HMGB4-201ENST00000425537 TMEM75Q8N9X5 138 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 DAZAP1Q96EP5 407 aaKnown RBP7.33□□□□□ -1.24
HMGB4-201ENST00000425537 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 YAE1D1Q9NRH1 226 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 RPH3ALQ9UNE2 315 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 ZFP30Q9Y2G7 519 aa7.33□□□□□ -1.24
HMGB4-201ENST00000425537 SOX21Q9Y651 276 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-201ENST00000425537 LOC105371267A0A1B0GV96 52 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 A0A1W2PPQ1 181 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 PGPEP1LA6NFU8 196 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 MRPS12O15235 138 aaKnown RBP7.32□□□□□ -1.24
HMGB4-201ENST00000425537 GATCO43716 136 aaKnown RBP7.32□□□□□ -1.24
HMGB4-201ENST00000425537 CD5LO43866 347 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 ELANEP08246 267 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 CXCL1P09341 107 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 CFHR3Q02985 330 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 FOXE3Q13461 319 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 SIGLEC15Q6ZMC9 328 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 LURAP1LQ8IV03 231 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 OR4X2Q8NGF9 303 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 NOL4LQ96MY1 436 aaPredicted RBP7.32□□□□□ -1.24
HMGB4-201ENST00000425537 LINC00527Q9UJ94 153 aa7.32□□□□□ -1.24
HMGB4-201ENST00000425537 FLNAP21333 2647 aaKnown RBP7.32□□□□□ -1.24
HMGB4-201ENST00000425537 K7EN84 100 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 HOXA3O43365 443 aaPredicted RBP7.31□□□□□ -1.24
HMGB4-201ENST00000425537 BUB3O43684 328 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 LTAP01374 205 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 GNG5P63218 68 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 SAPCD1Q5SSQ6 148 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 SAMD13Q5VXD3 122 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 GOLT1AQ6ZVE7 132 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 OR4B1Q8NGF8 309 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 SAV1Q9H4B6 383 aaPredicted RBP7.31□□□□□ -1.24
HMGB4-201ENST00000425537 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 AURKAIP1Q9NWT8 199 aaPredicted RBP7.31□□□□□ -1.24
HMGB4-201ENST00000425537 ZNF492Q9P255 531 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 PEF1Q9UBV8 284 aaKnown RBP7.31□□□□□ -1.24
HMGB4-201ENST00000425537 CELSR1Q9NYQ6 3014 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 MAP1AP78559 2803 aaPredicted RBP7.31□□□□□ -1.24
HMGB4-201ENST00000425537 VPS13CQ709C8 3753 aa7.31□□□□□ -1.24
HMGB4-201ENST00000425537 TRAV34A0A0B4J273 112 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 ZNF320A2RRD8 509 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 ZNF705GA8MUZ8 300 aaPredicted RBP7.3□□□□□ -1.24
HMGB4-201ENST00000425537 DIRC3C9JPN6 131 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 INAFM1C9JVW0 142 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 K7EMT4 169 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 CT45A10P0DMU9 189 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 PSMB8P28062 276 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 RPL15P61313 204 aaKnown RBP7.3□□□□□ -1.24
HMGB4-201ENST00000425537 PSG3Q16557 428 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 CT83Q5H943 113 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 WDR73Q6P4I2 378 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 Q86TA4 180 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 TMEM183AQ8IXX5 376 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 EXOC3-AS1Q8N2X6 119 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 MRPL53Q96EL3 112 aaKnown RBP7.3□□□□□ -1.24
HMGB4-201ENST00000425537 NDFIP1Q9BT67 221 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 UFC1Q9Y3C8 167 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 U3KQE9 123 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 V9GYV3 84 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 ACANP16112 2415 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 F8P00451 2351 aa7.3□□□□□ -1.24
HMGB4-201ENST00000425537 HIVEP1P15822 2718 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 ABCA1O95477 2261 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 IGHV3-35A0A0C4DH35 117 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 RBAKDNA6NC62 111 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 A8MWL6 223 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 H3BTX0 84 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 IGLV2-8P01709 118 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 P01737 135 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 MT-ND6P03923 174 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 SNRPCP09234 159 aaKnown RBP7.29□□□□□ -1.24
HMGB4-201ENST00000425537 OR5I1Q13606 314 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 RASL11AQ6T310 242 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 C16orf54Q6UWD8 224 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 ZFP82Q8N141 532 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 Q8N2B8 174 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 SIGLECL1Q8N7X8 197 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 ZNF331Q9NQX6 463 aaPredicted RBP7.29□□□□□ -1.24
HMGB4-201ENST00000425537 TMEM160Q9NX00 188 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 PSG8Q9UQ74 426 aa7.29□□□□□ -1.24
HMGB4-201ENST00000425537 SMIM27A0A1W2PRY6 76 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 XKRY2A2RUG3 117 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 CLPSL1A2RUU4 121 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 FAM231BA6NCW3 169 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 IGHV3-11P01762 117 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 TRGC2P03986 189 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 PRR27Q6MZM9 219 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 PRNTQ86SH4 94 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 GPHB5Q86YW7 130 aa7.28□□□□□ -1.24
HMGB4-201ENST00000425537 GBGT1Q8N5D6 347 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms