RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 ARL6Q9H0F7 186 aa13.33□□□□□ -0.28
VARS2-202ENST00000421263 NACAE9PAV3 2078 aa13.33□□□□□ -0.28
VARS2-202ENST00000421263 IGLV2-18A0A075B6J9 118 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 TRAV12-2A0A075B6T6 113 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 BOLA2-SMG1P6H3BVE0 249 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 CNPY1Q3B7I2 92 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 C15orf53Q8NAA6 179 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 GGACTQ9BVM4 153 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 ARV1Q9H2C2 271 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 RNF24Q9Y225 148 aa13.32□□□□□ -0.28
VARS2-202ENST00000421263 RCL1Q9Y2P8 373 aaKnown RBP13.32□□□□□ -0.28
VARS2-202ENST00000421263 LINC00854A0A1B0GVQ3 168 aa13.31□□□□□ -0.28
VARS2-202ENST00000421263 CENPXA8MT69 81 aa13.31□□□□□ -0.28
VARS2-202ENST00000421263 TMEM256Q8N2U0 113 aa13.31□□□□□ -0.28
VARS2-202ENST00000421263 MGAT4CQ9UBM8 478 aa13.31□□□□□ -0.28
VARS2-202ENST00000421263 RYR1P21817 5038 aa13.31□□□□□ -0.28
VARS2-202ENST00000421263 C7orf66A4D0T2 115 aa13.3□□□□□ -0.28
VARS2-202ENST00000421263 MBPP02686 304 aaPredicted RBP13.3□□□□□ -0.28
VARS2-202ENST00000421263 MED14OSP0DP75 135 aa13.3□□□□□ -0.28
VARS2-202ENST00000421263 CXCL2P19875 107 aa13.3□□□□□ -0.28
VARS2-202ENST00000421263 FAM3BP58499 235 aaPredicted RBP13.3□□□□□ -0.28
VARS2-202ENST00000421263 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
VARS2-202ENST00000421263 SLC38A11Q08AI6 406 aa13.3□□□□□ -0.28
VARS2-202ENST00000421263 ZNF331Q9NQX6 463 aaPredicted RBP13.3□□□□□ -0.28
VARS2-202ENST00000421263 GSKIPQ9P0R6 139 aa13.3□□□□□ -0.28
VARS2-202ENST00000421263 AGPAT2O15120 278 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 SCGB1D2O95969 90 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 IL7P13232 177 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 TAS2R60P59551 318 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 RHOBP62745 196 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 FCN2Q15485 313 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 ZNF546Q86UE3 836 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 LRRC20Q8TCA0 184 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 TMEM37Q8WXS4 190 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 RPUSD4Q96CM3 377 aaKnown RBP13.29□□□□□ -0.28
VARS2-202ENST00000421263 LINC01587Q99440 93 aa13.29□□□□□ -0.28
VARS2-202ENST00000421263 GOSR2O14653 212 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 PLA2G10O15496 165 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 DEFB130BP0DP73 79 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 DEFB130AP0DP74 79 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 LCN15Q6UWW0 184 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 SLC50A1Q9BRV3 221 aa13.28□□□□□ -0.28
VARS2-202ENST00000421263 CBY3A6NI87 242 aa13.27□□□□□ -0.29
VARS2-202ENST00000421263 CDKN1BP46527 198 aa13.27□□□□□ -0.29
VARS2-202ENST00000421263 MGST2Q99735 147 aa13.27□□□□□ -0.29
VARS2-202ENST00000421263 PPP1R14DQ9NXH3 145 aa13.27□□□□□ -0.29
VARS2-202ENST00000421263 SOHLH1Q5JUK2 328 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 C1orf134Q5TEV5 83 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 MORN5Q5VZ52 161 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 ZNF493Q6ZR52 646 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 BPIFA4PQ86YQ2 179 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 C16orf74Q96GX8 76 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 C20orf144Q9BQM9 153 aa13.26□□□□□ -0.29
VARS2-202ENST00000421263 ATP5G1P05496 136 aa13.25□□□□□ -0.29
VARS2-202ENST00000421263 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
VARS2-202ENST00000421263 ATP5G3P48201 142 aa13.25□□□□□ -0.29
VARS2-202ENST00000421263 RNASE8Q8TDE3 154 aaKnown RBP13.25□□□□□ -0.29
VARS2-202ENST00000421263 SAT2Q96F10 170 aaPredicted RBP13.25□□□□□ -0.29
VARS2-202ENST00000421263 C20orf85Q9H1P6 137 aa13.25□□□□□ -0.29
VARS2-202ENST00000421263 C11orf1Q9H5F2 150 aa13.25□□□□□ -0.29
VARS2-202ENST00000421263 TIMM8BQ9Y5J9 83 aaPredicted RBP13.25□□□□□ -0.29
VARS2-202ENST00000421263 F5H768 121 aa13.24□□□□□ -0.29
VARS2-202ENST00000421263 SNRPCP09234 159 aaKnown RBP13.24□□□□□ -0.29
VARS2-202ENST00000421263 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
VARS2-202ENST00000421263 OPCMLQ14982 345 aa13.24□□□□□ -0.29
VARS2-202ENST00000421263 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 H7BYZ3 331 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 SLC17A3O00476 420 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 CCSO14618 274 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 LYRM1O43325 122 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 COX7A2P2O60397 106 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 TCRBP04435 133 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 KIR3DS1Q14943 382 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 ZNRF2Q8NHG8 242 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 TMEM263Q8WUH6 116 aaKnown RBP13.23□□□□□ -0.29
VARS2-202ENST00000421263 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 DNAJC4Q9NNZ3 241 aa13.23□□□□□ -0.29
VARS2-202ENST00000421263 H3BQ15 152 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 L7N2F9 121 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 HTN1P15515 57 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 CAMLGP49069 296 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 VAMP2P63027 116 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 LINC00612Q8N6U2 182 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
VARS2-202ENST00000421263 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 PXMP4Q9Y6I8 212 aa13.22□□□□□ -0.29
VARS2-202ENST00000421263 ABCA13Q86UQ4 5058 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 IL15RAQ13261 267 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 Q6ZRG5 221 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 NRARPQ7Z6K4 114 aa13.21□□□□□ -0.29
VARS2-202ENST00000421263 ZNF431Q8TF32 576 aaPredicted RBP13.21□□□□□ -0.29
VARS2-202ENST00000421263 LSM5Q9Y4Y9 91 aaKnown RBP13.21□□□□□ -0.29
VARS2-202ENST00000421263 MUC4Q99102 2169 aa13.2□□□□□ -0.3
VARS2-202ENST00000421263 TRAV5A0A0B4J249 113 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms