RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 ZNF207O43670 478 aaKnown RBP8.6□□□□□ -1.03
DDX56-203ENST00000421223 PRB1P04280 392 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 BRS3P32247 399 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 LY6EQ16553 131 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 FAM19A2Q8N3H0 131 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 NDUFAF3Q9BU61 184 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 THYN1Q9P016 225 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
DDX56-203ENST00000421223 SOX21Q9Y651 276 aaPredicted RBP8.6□□□□□ -1.03
DDX56-203ENST00000421223 IZUMO1RA6ND01 250 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 LINC00310P59036 64 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 KRTDAPP60985 99 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 CHRDL1Q9BU40 450 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
DDX56-203ENST00000421223 MRPL27Q9P0M9 148 aaKnown RBP8.6□□□□□ -1.03
DDX56-203ENST00000421223 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 SMIM27A0A1W2PRY6 76 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 ATP6V0E1O15342 81 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 DLEU1O43261 78 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 MYCNOSP40205 109 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 ATP5J2P56134 94 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 GRAMD2BQ96HH9 432 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 SHANK2-AS3Q9BTD1 123 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 C1RLQ9NZP8 487 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 IGLV11-55A0A075B6I3 123 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 ESDP10768 282 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 AMTP48728 403 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 FOXA3P55318 350 aaPredicted RBP8.59□□□□□ -1.03
DDX56-203ENST00000421223 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 LBHQ53QV2 105 aaPredicted RBP8.59□□□□□ -1.03
DDX56-203ENST00000421223 MINOS1Q5TGZ0 78 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 TOMM20LQ6UXN7 152 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 Q8N9W7 124 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 RCHY1Q96PM5 261 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 CCL19Q99731 98 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 MINOS1-NBL1R4GNA1 71 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 ZFHX3Q15911 3703 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 PTPN13Q12923 2485 aa8.59□□□□□ -1.03
DDX56-203ENST00000421223 TRAV40A0A0B4J280 105 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 IGHV4-61A0A0C4DH41 118 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 MUC21A0A0G2JKD1 596 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 MUC21A0A140T8X8 626 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 CLEC3BP05452 202 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 UBE2E1P51965 193 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 TPPP2P59282 170 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 PLP1P60201 277 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 MUC21Q5SSG8 566 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 SIGLECL1Q8N7X8 197 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 OTORQ9NRC9 128 aa8.59□□□□□ -1.04
DDX56-203ENST00000421223 BMPR1BO00238 502 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 NPFFO15130 113 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 TOMM40O96008 361 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 RHOGP84095 191 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 TMEM208Q9BTX3 173 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 SELENOKQ9Y6D0 94 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 TRBV19A0A075B6N1 114 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 GDF5OSQ5U4N7 250 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 SHISA2Q6UWI4 295 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 CLEC19AQ6UXS0 136 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 VN1R17PQ8TDU5 208 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
DDX56-203ENST00000421223 RPP21Q9H633 154 aaKnown RBP8.58□□□□□ -1.04
DDX56-203ENST00000421223 POLR3KQ9Y2Y1 108 aaPredicted RBP8.58□□□□□ -1.04
DDX56-203ENST00000421223 CSMD2Q7Z408 3487 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 CENPVL3A0A0U1RRI6 287 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 VWC2LB2RUY7 222 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 HLA-DQA1P01909 254 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 TSKUQ8WUA8 353 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 AAMDCQ9H7C9 122 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 NAGKQ9UJ70 344 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 A1L4Q6 167 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 H3BRN7 92 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 TCF21O43680 179 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 EGR2P11161 476 aaPredicted RBP8.57□□□□□ -1.04
DDX56-203ENST00000421223 HLA-DMBP28068 263 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 C1orf194Q5T5A4 169 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
DDX56-203ENST00000421223 TLN2Q9Y4G6 2542 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 CREBBPQ92793 2442 aa8.57□□□□□ -1.04
DDX56-203ENST00000421223 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
DDX56-203ENST00000421223 NPIPB5A8MRT5 1133 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 A8MWL6 223 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 M0QZ24 198 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
DDX56-203ENST00000421223 MT-ND6P03923 174 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 LINC00614P0C842 121 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 PAX2Q02962 417 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 Q6ZWC4 215 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 Q86TA4 180 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 TTC9CQ8N5M4 171 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 TRBV9A0A0B4J1U6 114 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 KIR2DL5BA0A0G2JN68 375 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 KIR2DL5BA0A0G2JPC4 375 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 ZNF785A8K8V0 405 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 K7EQM0 130 aa8.56□□□□□ -1.04
DDX56-203ENST00000421223 CTSGP08311 255 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms