RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 NRARPQ7Z6K4 114 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
LINC00339-203ENST00000420503 A0A0J9YY99 117 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 H3BP45 60 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 BOLA2-SMG1P6H3BVE0 249 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 ADAP1O75689 374 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 ATP5G1P05496 136 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 SNRPCP09234 159 aaKnown RBP8.92□□□□□ -0.98
LINC00339-203ENST00000420503 H2AFB2P0C5Z0 115 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 HOXA5P20719 270 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 ATP5G3P48201 142 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 CCL18P55774 89 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 HIST1H1AQ02539 215 aaPredicted RBP8.92□□□□□ -0.98
LINC00339-203ENST00000420503 ZNF738Q8NE65 137 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 LINC01587Q99440 93 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 Q9H8V8 135 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 NOP10Q9NPE3 64 aaKnown RBP8.92□□□□□ -0.98
LINC00339-203ENST00000420503 PFDN2Q9UHV9 154 aa8.92□□□□□ -0.98
LINC00339-203ENST00000420503 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 H3BRN7 92 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 HOXB5P09067 269 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 TSPOP30536 169 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 MEOX2P50222 304 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 DEFA1P59665 94 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 DEFA3P59666 94 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 GGNBP1Q5YKI7 109 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 ENKURQ8TC29 256 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 MARVELD1Q9BSK0 173 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 CACFD1Q9UGQ2 172 aa8.91□□□□□ -0.98
LINC00339-203ENST00000420503 CBY3A6NI87 242 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 CCNKO75909 580 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 IL5P05113 134 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 FABP1P07148 127 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 CXCL3P19876 107 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 RHOBP62745 196 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 OR5I1Q13606 314 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 CLINT1Q14677 625 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 ESRGQ1W209 222 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 ACOT7LQ6ZUV0 252 aa8.9□□□□□ -0.98
LINC00339-203ENST00000420503 RNASE8Q8TDE3 154 aaKnown RBP8.9□□□□□ -0.98
LINC00339-203ENST00000420503 ZNF431Q8TF32 576 aaPredicted RBP8.9□□□□□ -0.98
LINC00339-203ENST00000420503 WRBO00258 174 aa8.89□□□□□ -0.99
LINC00339-203ENST00000420503 DUSP14O95147 198 aaKnown RBP8.89□□□□□ -0.99
LINC00339-203ENST00000420503 OR8A1Q8NGG7 326 aa8.89□□□□□ -0.99
LINC00339-203ENST00000420503 TMEM147Q9BVK8 224 aa8.89□□□□□ -0.99
LINC00339-203ENST00000420503 ZNF586Q9NXT0 402 aa8.89□□□□□ -0.99
LINC00339-203ENST00000420503 PRAC2D3DTV9 90 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 H3BTX0 84 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 TAS2R60P59551 318 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 RAB11AP62491 216 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 AKR1C1Q04828 323 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 SPANXN5Q5MJ07 72 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 BPIFCQ8NFQ6 507 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 OR4D5Q8NGN0 318 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 SHANK2-AS3Q9BTD1 123 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 Q9H3A6 140 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
LINC00339-203ENST00000420503 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GAGE12BA1L429 117 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 INMT-MINDY4F8WBC2 141 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 J3KRW8 73 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
LINC00339-203ENST00000420503 PRAF2O60831 178 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GAGE7O76087 117 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 PTTG1O95997 202 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 ID3Q02535 119 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 Q6ZRN7 208 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-203ENST00000420503 TMEM144Q7Z5S9 345 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 C12orf45Q8N5I9 185 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-203ENST00000420503 LINC00612Q8N6U2 182 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 GNPNAT1Q96EK6 184 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-203ENST00000420503 C16orf74Q96GX8 76 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 SLC45A2Q9UMX9 530 aa8.87□□□□□ -0.99
LINC00339-203ENST00000420503 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
LINC00339-203ENST00000420503 SMCO3A2RU48 225 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 CCSO14618 274 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 SYNGR2O43760 224 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 ATP5IP56385 69 aaPredicted RBP8.86□□□□□ -0.99
LINC00339-203ENST00000420503 LINC00315P59091 139 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 PSG3Q16557 428 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 PATE2Q6UY27 113 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 CYP2G1PQ6ZSU1 146 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 RPUSD4Q96CM3 377 aaKnown RBP8.86□□□□□ -0.99
LINC00339-203ENST00000420503 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
LINC00339-203ENST00000420503 EPM2AB3EWF7 344 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 SLC17A3O00476 420 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 OR5G3P0C626 314 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 LINC00869P0C866 280 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 XGP55808 180 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 IAH1Q2TAA2 248 aaPredicted RBP8.85□□□□□ -0.99
LINC00339-203ENST00000420503 GFI1BQ5VTD9 330 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 MORN5Q5VZ52 161 aa8.85□□□□□ -0.99
LINC00339-203ENST00000420503 ZBTB8BQ8NAP8 495 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms