RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 CCDC190Q86UF4 302 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 KIR2DL5AQ8N109 375 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 C1orf158Q8N1D5 194 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 KIR2DL5BQ8NHK3 375 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 Q8WTZ3 238 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 RBPMSQ93062 196 aaKnown RBP2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF486Q96H40 463 aaPredicted RBP2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 CMTM3Q96MX0 182 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 TSC22D3Q99576 134 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 PARD6GQ9BYG4 376 aaPredicted RBP2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 SLIRPQ9GZT3 109 aaKnown RBP2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 VCX3AQ9NNX9 186 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 ENY2Q9NPA8 101 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 MCUBQ9NWR8 336 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 DOK5Q9P104 306 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 C14orf166Q9Y224 244 aaKnown RBP2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 TP53TG1Q9Y2A0 90 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 TMEM56-RWDD3S4R434 201 aa2.44□□□□□ -2.02
SEMA3A-202ENST00000420047 IGHV4-4A0A075B6R2 117 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 NUPR2A6NF83 97 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF705GA8MUZ8 300 aaPredicted RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 DISC1C4P0D8 188 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 H3BMM0 161 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 CYB5BO43169 146 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 IFNA4P05014 189 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 RD3LP0DJH9 198 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SULT1A3P0DMM9 295 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SULT1A4P0DMN0 295 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SPP1P10451 314 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 NPY1RP25929 384 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 S100GP29377 79 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 FUSP35637 526 aaKnown RBP eCLIP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 RPL5P46777 297 aaKnown RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SUB1P53999 127 aaKnown RBP eCLIP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 LYZP61626 148 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 RRAS2P62070 204 aaPredicted RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 FGL1Q08830 312 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 PPP1R1AQ13522 171 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF79Q15937 498 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 PYDC2Q56P42 97 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 NMSQ5H8A3 153 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 LGALS9CQ6DKI2 356 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 THOC7Q6I9Y2 204 aaKnown RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 HSD17B13Q7Z5P4 300 aaPredicted RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 LGI3Q8N145 548 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 RNF182Q8N6D2 247 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 CCDC71LQ8N9Z2 235 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 OR1S1Q8NH92 325 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 MCFD2Q8NI22 146 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 DTD1Q8TEA8 209 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SMIM4Q8WVI0 70 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 BORCS5Q969J3 196 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 METTL26Q96S19 204 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SDHCQ99643 169 aaPredicted RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 GINS3Q9BRX5 216 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 PDCD10Q9BUL8 212 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 MRPS26Q9BYN8 205 aaKnown RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SLC25A39Q9BZJ4 359 aaPredicted RBP2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 SLC25A22Q9H936 323 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 FRAS1Q86XX4 4008 aa2.43□□□□□ -2.02
SEMA3A-202ENST00000420047 TRAV12-2A0A075B6T6 113 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 DEFB131BA0A096LNP1 70 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 TRAV8-2A0A0B4J237 113 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 TRAV5A0A0B4J249 113 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 HELTA6NFD8 242 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 CCDC160A6NGH7 325 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ZFP92A6NM28 416 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF705FA8MVS1 300 aaPredicted RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF705EA8MWA4 302 aaPredicted RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 PRSS46E5RG02 174 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 INS-IGF2F8WCM5 200 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 J3KRW8 73 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 M0R2Z0 102 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 SOCS3O14543 225 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 CCSO14618 274 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 CTDSPLO15194 276 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 GSTZ1O43708 216 aaPredicted RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 PITX3O75364 302 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 EIF3GO75821 320 aaKnown RBP eCLIP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 HTN1P15515 57 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ORM2P19652 201 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ANXA7P20073 488 aaKnown RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 HTR2BP41595 481 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 PAX9P55771 341 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 YPEL3P61236 119 aaPredicted RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 POLR2GP62487 172 aaKnown RBP eCLIP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 SMCO1Q147U7 214 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 SPANXN5Q5MJ07 72 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 FAM78BQ5VT40 261 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 PATE2Q6UY27 113 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 SIGLEC15Q6ZMC9 328 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 Q6ZQT7 251 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 ZNF709Q8N972 641 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 OR1S2Q8NGQ3 325 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 OR52E5Q8NH55 327 aa2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 FAM212BQ9NTI7 297 aaPredicted RBP2.42□□□□□ -2.02
SEMA3A-202ENST00000420047 TBC1D24Q9ULP9 559 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms