RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 FLVCR2Q9UPI3 526 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 RNF24Q9Y225 148 aa12.18□□□□□ -0.46
PTCD1-202ENST00000419981 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 F5H768 121 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 AZU1P20160 251 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 TEPPQ6URK8 271 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 LINC01587Q99440 93 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 ARV1Q9H2C2 271 aa12.17□□□□□ -0.46
PTCD1-202ENST00000419981 K7EPK0 472 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 ATP5G1P05496 136 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 ANXA7P20073 488 aaKnown RBP12.16□□□□□ -0.46
PTCD1-202ENST00000419981 ATP5G3P48201 142 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 TAS2R60P59551 318 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 SLC38A11Q08AI6 406 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 FCN2Q15485 313 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 BAK1Q16611 211 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 IAH1Q2TAA2 248 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-202ENST00000419981 C4orf46Q504U0 113 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 PXDC1Q5TGL8 231 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 PATE2Q6UY27 113 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 C16orf74Q96GX8 76 aa12.16□□□□□ -0.46
PTCD1-202ENST00000419981 TSC22D2O75157 780 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 NUDT3O95989 172 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 HTN1P15515 57 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 CXCL2P19875 107 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 CDKN1BP46527 198 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 TAS2R30P59541 319 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 LCN15Q6UWW0 184 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 ZNF546Q86UE3 836 aa12.15□□□□□ -0.46
PTCD1-202ENST00000419981 RPUSD4Q96CM3 377 aaKnown RBP12.15□□□□□ -0.46
PTCD1-202ENST00000419981 RBM38Q9H0Z9 239 aaKnown RBP12.15□□□□□ -0.46
PTCD1-202ENST00000419981 LINC00854A0A1B0GVQ3 168 aa12.14□□□□□ -0.47
PTCD1-202ENST00000419981 CENPXA8MT69 81 aa12.14□□□□□ -0.47
PTCD1-202ENST00000419981 GOSR2O14653 212 aa12.14□□□□□ -0.47
PTCD1-202ENST00000419981 MRPS12O15235 138 aaKnown RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 PRB4P10163 310 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 ZBTB8BQ8NAP8 495 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 SLC50A1Q9BRV3 221 aa12.14□□□□□ -0.47
PTCD1-202ENST00000419981 ZNF331Q9NQX6 463 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 RCL1Q9Y2P8 373 aaKnown RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 TIMM8BQ9Y5J9 83 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-202ENST00000419981 CBY3A6NI87 242 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 AGPAT2O15120 278 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 BTCP35070 178 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 LINC00305Q7Z4B0 112 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 GSKIPQ9P0R6 139 aa12.13□□□□□ -0.47
PTCD1-202ENST00000419981 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-202ENST00000419981 ZNF493Q6ZR52 646 aa12.12□□□□□ -0.47
PTCD1-202ENST00000419981 BPIFA4PQ86YQ2 179 aa12.12□□□□□ -0.47
PTCD1-202ENST00000419981 TMEM263Q8WUH6 116 aaKnown RBP12.12□□□□□ -0.47
PTCD1-202ENST00000419981 C20orf144Q9BQM9 153 aa12.12□□□□□ -0.47
PTCD1-202ENST00000419981 GGACTQ9BVM4 153 aa12.12□□□□□ -0.47
PTCD1-202ENST00000419981 DYNC1H1Q14204 4646 aaKnown RBP12.11□□□□□ -0.47
PTCD1-202ENST00000419981 NBDYA0A0U1RRE5 68 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 COX7A2P2O60397 106 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 SNRPCP09234 159 aaKnown RBP12.11□□□□□ -0.47
PTCD1-202ENST00000419981 CCL18P55774 89 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 ARL16Q0P5N6 197 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 RNASE8Q8TDE3 154 aaKnown RBP12.11□□□□□ -0.47
PTCD1-202ENST00000419981 MITD1Q8WV92 249 aa12.11□□□□□ -0.47
PTCD1-202ENST00000419981 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
PTCD1-202ENST00000419981 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 C7orf66A4D0T2 115 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 H7BYZ3 331 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 MBPP02686 304 aaPredicted RBP12.1□□□□□ -0.47
PTCD1-202ENST00000419981 CNPY1Q3B7I2 92 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 RNF141Q8WVD5 230 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 MGST2Q99735 147 aa12.1□□□□□ -0.47
PTCD1-202ENST00000419981 NOP10Q9NPE3 64 aaKnown RBP12.1□□□□□ -0.47
PTCD1-202ENST00000419981 L7N2F9 121 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 VAMP2P63027 116 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 TNP2Q05952 138 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 CLINT1Q14677 625 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 C6orf223Q8N319 242 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 TMEM37Q8WXS4 190 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 PARD6GQ9BYG4 376 aaPredicted RBP12.09□□□□□ -0.47
PTCD1-202ENST00000419981 LINC00588Q9Y4M8 146 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 PXMP4Q9Y6I8 212 aa12.09□□□□□ -0.47
PTCD1-202ENST00000419981 H3BTX0 84 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 SLC17A3O00476 420 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 CCSO14618 274 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 IL7P13232 177 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 ZNF846Q147U1 533 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 KIR3DS1Q14943 382 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 OPCMLQ14982 345 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 C20orf85Q9H1P6 137 aa12.08□□□□□ -0.48
PTCD1-202ENST00000419981 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 IGLC2P0DOY2 106 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 CAMLGP49069 296 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 RAB31Q13636 194 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 GFI1BQ5VTD9 330 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 CCDC28AQ8IWP9 274 aa12.07□□□□□ -0.48
PTCD1-202ENST00000419981 LSM5Q9Y4Y9 91 aaKnown RBP12.07□□□□□ -0.48
PTCD1-202ENST00000419981 BCAP31P51572 246 aa12.06□□□□□ -0.48
PTCD1-202ENST00000419981 Q6ZRG5 221 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms