RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 KIR2DL5AQ8N109 375 aa9.17□□□□□ -0.94
SKA1-203ENST00000417656 KIR2DL5BQ8NHK3 375 aa9.17□□□□□ -0.94
SKA1-203ENST00000417656 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
SKA1-203ENST00000417656 MRPL32Q9BYC8 188 aaKnown RBP9.17□□□□□ -0.94
SKA1-203ENST00000417656 H3BQ15 152 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 CA1P00915 261 aaPredicted RBP9.16□□□□□ -0.94
SKA1-203ENST00000417656 PYYP10082 97 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 HLA-DRB4P13762 266 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 CXCL2P19875 107 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 C4BPBP20851 252 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 C4orf48Q5BLP8 95 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 RPL7L1Q6DKI1 246 aaKnown RBP9.16□□□□□ -0.94
SKA1-203ENST00000417656 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 OR11H4Q8NGC9 324 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 MFFQ9GZY8 342 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 CSTL1Q9H114 145 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 SAV1Q9H4B6 383 aaPredicted RBP9.16□□□□□ -0.94
SKA1-203ENST00000417656 RPRMQ9NS64 109 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 TIMM9Q9Y5J7 89 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 HLA-DRB4X5D2U9 266 aa9.16□□□□□ -0.94
SKA1-203ENST00000417656 H3BMM0 161 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 UBE2CO00762 179 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 EIF3GO75821 320 aaKnown RBP eCLIP9.15□□□□□ -0.94
SKA1-203ENST00000417656 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
SKA1-203ENST00000417656 ATP6V0CP27449 155 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 RAB2AP61019 212 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 ZNF738Q8NE65 137 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 LRRC20Q8TCA0 184 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 FAM167A-AS1Q96KT0 104 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 OVOL2Q9BRP0 275 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 SLC50A1Q9BRV3 221 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 HRH4Q9H3N8 390 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 ZNF331Q9NQX6 463 aaPredicted RBP9.15□□□□□ -0.94
SKA1-203ENST00000417656 ZNF586Q9NXT0 402 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 TMEM14CQ9P0S9 112 aa9.15□□□□□ -0.94
SKA1-203ENST00000417656 STAB2Q8WWQ8 2551 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 BORCS7-ASMTA0A0B4J1R7 106 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 A0A0J9YX75 114 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 SPP1P10451 314 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
SKA1-203ENST00000417656 MORN3Q6PF18 240 aaPredicted RBP9.14□□□□□ -0.95
SKA1-203ENST00000417656 Q6ZWC4 215 aa9.14□□□□□ -0.95
SKA1-203ENST00000417656 PSMG3Q9BT73 122 aaPredicted RBP9.14□□□□□ -0.95
SKA1-203ENST00000417656 SPRY2O43597 315 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 GIG44P09565 113 aaPredicted RBP9.13□□□□□ -0.95
SKA1-203ENST00000417656 OR10J4P0C629 311 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 HIST1H1EP10412 219 aaKnown RBP9.13□□□□□ -0.95
SKA1-203ENST00000417656 M6PRP20645 277 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 RHOBP62745 196 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 ZNF345Q14585 488 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 GUK1Q16774 197 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 EBLN2Q6P2I7 272 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 KCNRGQ8N5I3 272 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 OR4B1Q8NGF8 309 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 BLNKQ8WV28 456 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 RNF183Q96D59 192 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 SAT2Q96F10 170 aaPredicted RBP9.13□□□□□ -0.95
SKA1-203ENST00000417656 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
SKA1-203ENST00000417656 TRBV19A0A075B6N1 114 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 HMSDA8MTL9 139 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 OR7C2O60412 319 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 ZNF705DP0CH99 300 aaPredicted RBP9.12□□□□□ -0.95
SKA1-203ENST00000417656 ZNF705BP0CI00 300 aaPredicted RBP9.12□□□□□ -0.95
SKA1-203ENST00000417656 FXYD7P58549 80 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 PSG3Q16557 428 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 KHDC3LQ587J8 217 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 TCTE3Q8IZS6 198 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 OR10G4Q8NGN3 311 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 OR10G9Q8NGN4 311 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 OR10G7Q8NGN6 311 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 ZNF503Q96F45 646 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 ARPC5LQ9BPX5 153 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 PAXXQ9BUH6 204 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 CLEC5AQ9NY25 188 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 NBEAL2Q6ZNJ1 2754 aa9.12□□□□□ -0.95
SKA1-203ENST00000417656 TAAR5O14804 337 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 ZNF253O75346 499 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 NDUFB4O95168 129 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 CNN1P51911 297 aaKnown RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 TAS2R45P59539 299 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 HIST1H1AQ02539 215 aaPredicted RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 AKAP14Q86UN6 197 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 GNPNAT1Q96EK6 184 aaPredicted RBP9.11□□□□□ -0.95
SKA1-203ENST00000417656 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
SKA1-203ENST00000417656 A0A1B0GVG6 124 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms