RNA–Protein interactions for RNA: ENST00000417572.5

SEC22C-205, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22C, Length 1,513 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-205ENST00000417572 GCHFRP30047 84 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 KRTAP10-11P60412 298 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 FAM24BQ8N5W8 94 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 BLNKQ8WV28 456 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 SAT2Q96F10 170 aaPredicted RBP9.72□□□□□ -0.85
SEC22C-205ENST00000417572 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 TRAV2A0A0B4J234 112 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 A0A1B0GV50 99 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 OR4C46A6NHA9 309 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 SOCS3O14543 225 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 MEOX2P50222 304 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
SEC22C-205ENST00000417572 IFITM2Q01629 132 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 GUK1Q16774 197 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 BEAN1Q3B7T3 259 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 IGFL4Q6B9Z1 124 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 LRRC20Q8TCA0 184 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 C16orf92Q96LL3 132 aa9.72□□□□□ -0.85
SEC22C-205ENST00000417572 CMYA5Q8N3K9 4069 aa9.71□□□□□ -0.85
SEC22C-205ENST00000417572 SLC17A3O00476 420 aa9.71□□□□□ -0.86
SEC22C-205ENST00000417572 NDUFB4O95168 129 aa9.71□□□□□ -0.86
SEC22C-205ENST00000417572 SUN5Q8TC36 379 aa9.71□□□□□ -0.86
SEC22C-205ENST00000417572 UBQLN2Q9UHD9 624 aa9.71□□□□□ -0.86
SEC22C-205ENST00000417572 DNHD1Q96M86 4753 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 TRAV8-2A0A0B4J237 113 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 CD7P09564 240 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 BLOC1S1P78537 153 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 CCL20P78556 96 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
SEC22C-205ENST00000417572 TMEM167BQ9NRX6 74 aa9.7□□□□□ -0.86
SEC22C-205ENST00000417572 TRAV1-1A0A0B4J248 108 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 ISLRO14498 428 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF253O75346 499 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF688P0C7X2 276 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 HLA-DMBP28068 263 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 ID1P41134 155 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 RANP62826 216 aaKnown RBP9.69□□□□□ -0.86
SEC22C-205ENST00000417572 PDE6HQ13956 83 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 RNF182Q8N6D2 247 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 PCNPQ8WW12 178 aaKnown RBP9.69□□□□□ -0.86
SEC22C-205ENST00000417572 C20orf173Q96LM9 149 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 LINC00052Q96N35 136 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 PRR25Q96S07 402 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 SLC50A1Q9BRV3 221 aa9.69□□□□□ -0.86
SEC22C-205ENST00000417572 ZMAT5Q9UDW3 170 aaKnown RBP9.69□□□□□ -0.86
SEC22C-205ENST00000417572 HBE1P02100 147 aa9.68□□□□□ -0.86
SEC22C-205ENST00000417572 PSMB3P49720 205 aa9.68□□□□□ -0.86
SEC22C-205ENST00000417572 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
SEC22C-205ENST00000417572 SAMD13Q5VXD3 122 aa9.68□□□□□ -0.86
SEC22C-205ENST00000417572 EXOC3-AS1Q8N2X6 119 aa9.68□□□□□ -0.86
SEC22C-205ENST00000417572 TEX46H3BTG2 121 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 DEFB131AP59861 70 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 CD81P60033 236 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 PSG9Q00887 426 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 ODF3L2Q3SX64 289 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 PSMG4Q5JS54 123 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 KPRPQ5T749 579 aaPredicted RBP9.67□□□□□ -0.86
SEC22C-205ENST00000417572 GTSCR1Q86UQ5 136 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 Q9H3A6 140 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 C19orf73Q9NVV2 129 aa9.67□□□□□ -0.86
SEC22C-205ENST00000417572 PGPA6NDG6 321 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
SEC22C-205ENST00000417572 CMC4P56277 68 aaPredicted RBP9.66□□□□□ -0.86
SEC22C-205ENST00000417572 UBE2G2P60604 165 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 ICAM4Q14773 271 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 PSG3Q16557 428 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF767PQ75MW2 155 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 Q8N1Y9 231 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 LYPD1Q8N2G4 141 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 LYPD6BQ8NI32 183 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF705FA8MVS1 300 aaPredicted RBP9.66□□□□□ -0.86
SEC22C-205ENST00000417572 OR11H12B2RN74 326 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 NMBP08949 121 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 DEFB1P60022 68 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF124Q15973 351 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 APRG1Q8IVJ8 170 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 FAM110AQ9BQ89 295 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 WFDC10AQ9H1F0 79 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 AAMDCQ9H7C9 122 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 YTHDF2Q9Y5A9 579 aaKnown RBP9.66□□□□□ -0.86
SEC22C-205ENST00000417572 NOTCH3Q9UM47 2321 aa9.66□□□□□ -0.86
SEC22C-205ENST00000417572 A0A1W2PRE2 83 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 FAM74A7A6NL05 159 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 M0R3E3 92 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 PAGE4O60829 102 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
SEC22C-205ENST00000417572 SUMO1P63165 101 aaKnown RBP9.65□□□□□ -0.86
SEC22C-205ENST00000417572 ZNF738Q8NE65 137 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 OTORQ9NRC9 128 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 CLEC5AQ9NY25 188 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 GNG13Q9P2W3 67 aa9.65□□□□□ -0.86
SEC22C-205ENST00000417572 PRAC2D3DTV9 90 aa9.64□□□□□ -0.87
SEC22C-205ENST00000417572 PPT1P50897 306 aa9.64□□□□□ -0.87
SEC22C-205ENST00000417572 DEFB125Q8N687 156 aa9.64□□□□□ -0.87
SEC22C-205ENST00000417572 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
SEC22C-205ENST00000417572 PRELID1Q9Y255 219 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms