RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 OR4B1Q8NGF8 309 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 OR2T35Q8NGX2 323 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 OR11H2Q8NH07 326 aa13.15□□□□□ -0.3
SEMA3B-201ENST00000416295 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 F6UB75 175 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 IGKV3-20P01619 116 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 GCSAMLQ5JQS6 135 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 FAM78BQ5VT40 261 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 INO80EQ8NBZ0 244 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF738Q8NE65 137 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 TMEM14CQ9P0S9 112 aa13.14□□□□□ -0.31
SEMA3B-201ENST00000416295 A0A0J9YWU9 116 aa13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 DUSP14O95147 198 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF266Q14584 549 aa13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 Q5BKY6 102 aa13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 MRPL32Q9BYC8 188 aaKnown RBP13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 WFDC1Q9HC57 220 aa13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 CLEC5AQ9NY25 188 aa13.13□□□□□ -0.31
SEMA3B-201ENST00000416295 RYR3Q15413 4870 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 FXYD6-FXYD2A0A087WZ82 144 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 H3BQ15 152 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 PSG9Q00887 426 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 PSG3Q16557 428 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 FFAR4Q5NUL3 377 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 CSNK1G2-AS1Q8NCQ2 148 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
SEMA3B-201ENST00000416295 AGRNO00468 2067 aa13.11□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF253O75346 499 aa13.11□□□□□ -0.31
SEMA3B-201ENST00000416295 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-201ENST00000416295 SAT2Q96F10 170 aaPredicted RBP13.11□□□□□ -0.31
SEMA3B-201ENST00000416295 C11orf68Q9H3H3 251 aaKnown RBP13.11□□□□□ -0.31
SEMA3B-201ENST00000416295 A8MTW9 85 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF705EA8MWA4 302 aaPredicted RBP13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 H3BTX0 84 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 SLC17A3O00476 420 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 HIST1H1EP10412 219 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 HLA-DMBP28068 263 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 SLC25A2Q9BXI2 301 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 MFFQ9GZY8 342 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 TNFSF18Q9UNG2 199 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 FUT9Q9Y231 359 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 TIMM9Q9Y5J7 89 aa13.1□□□□□ -0.31
SEMA3B-201ENST00000416295 MIFP14174 115 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 RHOBP62745 196 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 PDE6HQ13956 83 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 MIR17HGQ75NE6 70 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 OR8A1Q8NGG7 326 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 SLC35B3Q9H1N7 401 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 DNAH7Q8WXX0 4024 aa13.09□□□□□ -0.31
SEMA3B-201ENST00000416295 TRBV19A0A075B6N1 114 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 AMBPP02760 352 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 PYYP10082 97 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 FXYD7P58549 80 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 AMTNQ6UX39 209 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 FAM167A-AS1Q96KT0 104 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 OR51M1Q9H341 326 aa13.08□□□□□ -0.32
SEMA3B-201ENST00000416295 G3V3Q6 166 aa13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 ZNF705DP0CH99 300 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 ZNF705BP0CI00 300 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 TAS2R45P59539 299 aa13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 ACOT6Q3I5F7 207 aaPredicted RBP13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 Q8NAQ8 132 aa13.07□□□□□ -0.32
SEMA3B-201ENST00000416295 OR7C2O60412 319 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 M6PRP20645 277 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 KHDC3LQ587J8 217 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 BLNKQ8WV28 456 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 MRPL53Q96EL3 112 aaKnown RBP13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 PSMG3Q9BT73 122 aaPredicted RBP13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 PAXXQ9BUH6 204 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 AAMDCQ9H7C9 122 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 X6R8D5 127 aa13.06□□□□□ -0.32
SEMA3B-201ENST00000416295 BORCS7-ASMTA0A0B4J1R7 106 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 IGHV4-28A0A0C4DH34 117 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 NBEAP1P0C6P0 100 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 OR10J6PQ8NGY7 276 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 OR2G3Q8NGZ4 309 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 RNF141Q8WVD5 230 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 GOLT1BQ9Y3E0 138 aa13.05□□□□□ -0.32
SEMA3B-201ENST00000416295 A0A1W2PPV4 95 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 ARPC5O15511 151 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 NDUFB4O95168 129 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 SPINK13Q1W4C9 94 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 FXYD5Q96DB9 178 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 IGF2BP2-AS1Q96M15 143 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 NEU1Q99519 415 aa13.04□□□□□ -0.32
SEMA3B-201ENST00000416295 RFNGQ9Y644 331 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms