RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PLA2G10O15496 165 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 GSTZ1O43708 216 aaPredicted RBP1.75□□□□□ -2.13
MCF2-204ENST00000414978 ZNF861PO60384 105 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 CD79AP11912 226 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 CDK2P24941 298 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 ZNF93P35789 620 aaPredicted RBP1.75□□□□□ -2.13
MCF2-204ENST00000414978 TAS2R20P59543 309 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 PSG4Q00888 419 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 MPPED2Q15777 294 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 PABPC1L2AQ5JQF8 200 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 DPPA2Q7Z7J5 298 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 ZNF101Q8IZC7 436 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 SMIM4Q8WVI0 70 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 SLC7A6Q92536 515 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 STARD4Q96DR4 205 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 CPNE2Q96FN4 548 aaPredicted RBP1.75□□□□□ -2.13
MCF2-204ENST00000414978 S100A13Q99584 98 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 B9D2Q9BPU9 175 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 CHAC1Q9BUX1 264 aa1.75□□□□□ -2.13
MCF2-204ENST00000414978 SPANXB1Q9NS25 103 aaPredicted RBP1.75□□□□□ -2.13
MCF2-204ENST00000414978 MRPL27Q9P0M9 148 aaKnown RBP1.75□□□□□ -2.13
MCF2-204ENST00000414978 MALRD1Q5VYJ5 2156 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.74□□□□□ -2.13
MCF2-204ENST00000414978 GGT3PA6NGU5 568 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ORC5O43913 435 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 FAUP35544 74 aaKnown RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 SPIN3Q5JUX0 258 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ANGPTL5Q86XS5 388 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 CNEP1R1Q8N9A8 125 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 NPBQ8NG41 125 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 PP6455Q8WZ26 134 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 REEP6Q96HR9 211 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 KRTAP9-8Q9BYQ0 159 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 C16orf95Q9H693 158 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 VPS13CQ709C8 3753 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 FAT2Q9NYQ8 4349 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 TRBV6-6A0A0A6YYG2 114 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 C5orf49A4QMS7 147 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 LY6LH3BQJ8 138 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 M0R036 132 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 LGALS9O00182 355 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 PDCD6O75340 191 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ATP5G1P05496 136 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 UBBP0CG47 229 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 OR13C7P0DN81 318 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 SRP9P49458 86 aaKnown RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 HERVK_113P61574 105 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 SYCNQ0VAF6 134 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ACOT6Q3I5F7 207 aaPredicted RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 GLIPR1L1Q6UWM5 242 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 CAMK2N2Q96S95 79 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 SEC22CQ9BRL7 303 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 CST11Q9H112 138 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 TAS2R8Q9NYW2 309 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 COPZ2Q9P299 210 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 CELA1Q9UNI1 258 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 V9GYS6 101 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 NAP1L6A6NFF2 107 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ZNF850A8MQ14 1090 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 INMT-MINDY4F8WBC2 141 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 CRXO43186 299 aaPredicted RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 IGLV3-1P01715 115 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 HBZP02008 142 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 PTHLHP12272 177 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 GTF2F2P13984 249 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 SRP14P37108 136 aaKnown RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 EIF2B2P49770 351 aaKnown RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 KISS1Q15726 138 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 ZNF429Q86V71 674 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 OR5AS1Q8N127 324 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 TNFAIP8L1Q8WVP5 186 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 C1orf147Q96MC9 270 aaPredicted RBP1.74□□□□□ -2.13
MCF2-204ENST00000414978 YPEL4Q96NS1 127 aa1.74□□□□□ -2.13
MCF2-204ENST00000414978 DNAH10Q8IVF4 4471 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 IGKV1-9A0A0C4DH69 117 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 MEIS3P1A6NDR6 274 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DISC1C4P0D8 188 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 CCNKO75909 580 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 LYZL6O75951 148 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 CYB5AP00167 134 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 IGKV1-39P01597 117 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 IGKV1D-39P04432 117 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 VEGFCP49767 419 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DSCR10P59022 87 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 GNG2P59768 71 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 SSBP1Q04837 148 aaKnown RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 SLC30A7Q8NEW0 376 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 OR51T1Q8NGJ9 327 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 CIRBP-AS1Q8TBR5 109 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 DEDD2Q8WXF8 326 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 SEH1LQ96EE3 360 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 BORCS8Q96FH0 119 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 ALX4Q9H161 411 aaPredicted RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 BANF2Q9H503 90 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 JPT1Q9UK76 154 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 FREM1Q5H8C1 2179 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TACC2O95359 2948 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 MAP1AP78559 2803 aaPredicted RBP1.73□□□□□ -2.13
MCF2-204ENST00000414978 TMEM235A6NFC5 223 aa1.73□□□□□ -2.13
MCF2-204ENST00000414978 TMEM14DPA8MWL7 114 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms