RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 JTBO76095 146 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 HIST1H1EP10412 219 aaKnown RBP10.77□□□□□ -0.69
LIMS1-206ENST00000414829 M6PRP20645 277 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 SERF2P84101 59 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 DEFB135Q30KP9 77 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 OR2G3Q8NGZ4 309 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 RNF183Q96D59 192 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 MFFQ9GZY8 342 aa10.77□□□□□ -0.69
LIMS1-206ENST00000414829 ZNF331Q9NQX6 463 aaPredicted RBP10.77□□□□□ -0.69
LIMS1-206ENST00000414829 A0A1W2PPV4 95 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 HMSDA8MTL9 139 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 AMBPP02760 352 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 PSG9Q00887 426 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 MORN5Q5VZ52 161 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
LIMS1-206ENST00000414829 WFDC1Q9HC57 220 aa10.76□□□□□ -0.69
LIMS1-206ENST00000414829 A0A0J9YX75 114 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 G3V3Q6 166 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 OR7C2O60412 319 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 PSG3Q16557 428 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 GCSAMLQ5JQS6 135 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 Q6ZNX1 250 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 HSD17B11Q8NBQ5 300 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 IL17DQ8TAD2 202 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 DNAH9Q9NYC9 4486 aa10.75□□□□□ -0.69
LIMS1-206ENST00000414829 TGP01266 2768 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 TRBV19A0A075B6N1 114 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 TRAV8-2A0A0B4J237 113 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 A0A0D9SG52 128 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 EIF5AP63241 154 aaKnown RBP10.74□□□□□ -0.69
LIMS1-206ENST00000414829 PQLC2Q6ZP29 291 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 OR4B1Q8NGF8 309 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 PAXXQ9BUH6 204 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 SLC25A2Q9BXI2 301 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 OR51M1Q9H341 326 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 RETNQ9HD89 108 aa10.74□□□□□ -0.69
LIMS1-206ENST00000414829 TRAV5A0A0B4J249 113 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 ATP6V0CP27449 155 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 UBE2L3P68036 154 aaKnown RBP10.73□□□□□ -0.69
LIMS1-206ENST00000414829 TCTE3Q8IZS6 198 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 RPUSD4Q96CM3 377 aaKnown RBP10.73□□□□□ -0.69
LIMS1-206ENST00000414829 SAT2Q96F10 170 aaPredicted RBP10.73□□□□□ -0.69
LIMS1-206ENST00000414829 C20orf173Q96LM9 149 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 ARPC5LQ9BPX5 153 aa10.73□□□□□ -0.69
LIMS1-206ENST00000414829 KANTRA0A1W2PQU2 76 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 A8MTW9 85 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 H3BQ15 152 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 NBEAP1P0C6P0 100 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 RPL7L1Q6DKI1 246 aaKnown RBP10.72□□□□□ -0.69
LIMS1-206ENST00000414829 LYPD1Q8N2G4 141 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 KCNRGQ8N5I3 272 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 OR8A1Q8NGG7 326 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 OR10G4Q8NGN3 311 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 OR10G9Q8NGN4 311 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 OR10G7Q8NGN6 311 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 FAM167A-AS1Q96KT0 104 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 RARRES2Q99969 163 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 ZNF586Q9NXT0 402 aa10.72□□□□□ -0.69
LIMS1-206ENST00000414829 SLC17A3O00476 420 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 PYYP10082 97 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 C4BPBP20851 252 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 CDC34P49427 236 aaPredicted RBP10.71□□□□□ -0.69
LIMS1-206ENST00000414829 CNN1P51911 297 aaKnown RBP10.71□□□□□ -0.69
LIMS1-206ENST00000414829 HIST1H1AQ02539 215 aaPredicted RBP10.71□□□□□ -0.69
LIMS1-206ENST00000414829 GDF5OSQ5U4N7 250 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 AKAP14Q86UN6 197 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 OR11H2Q8NH07 326 aa10.71□□□□□ -0.69
LIMS1-206ENST00000414829 SMLR1H3BR10 107 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 IGKV3-20P01619 116 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 MIFP14174 115 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 TSPOP30536 169 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 RAB2AP61019 212 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 FAM74A1Q5RGS3 127 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 AKR1C8PQ5T2L2 129 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 BLNKQ8WV28 456 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 ACTR3CQ9C0K3 210 aaPredicted RBP10.7□□□□□ -0.7
LIMS1-206ENST00000414829 C11orf68Q9H3H3 251 aaKnown RBP10.7□□□□□ -0.7
LIMS1-206ENST00000414829 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 GOLT1BQ9Y3E0 138 aa10.7□□□□□ -0.7
LIMS1-206ENST00000414829 F6UB75 175 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 C3orf84H3BNL1 204 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 BOLA2-SMG1P6H3BVE0 249 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 BCL2L11O43521 198 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 PFDN1O60925 122 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 CSN1S1P47710 185 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 IGFL4Q6B9Z1 124 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 FAM122CQ6P4D5 195 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 MUC7Q8TAX7 377 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 FXYD5Q96DB9 178 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 XCL2Q9UBD3 114 aa10.69□□□□□ -0.7
LIMS1-206ENST00000414829 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms