RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 OXA1LQ15070 435 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 FAM78BQ5VT40 261 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 EBLN2Q6P2I7 272 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 OR4B1Q8NGF8 309 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 ATP5SQ99766 215 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 C1QTNF4Q9BXJ3 329 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 WDR61Q9GZS3 305 aaKnown RBP7.33□□□□□ -1.24
TMEM248-202ENST00000413593 CLEC5AQ9NY25 188 aa7.33□□□□□ -1.24
TMEM248-202ENST00000413593 DNAH7Q8WXX0 4024 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 IGKV3-20P01619 116 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 SNRPCP09234 159 aaKnown RBP7.32□□□□□ -1.24
TMEM248-202ENST00000413593 IGLC2P0DOY2 106 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 CXCL2P19875 107 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 GCSAMLQ5JQS6 135 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 LCN15Q6UWW0 184 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 LRRC20Q8TCA0 184 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 SLC50A1Q9BRV3 221 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 SMIM3Q9BZL3 60 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 C11orf68Q9H3H3 251 aaKnown RBP7.32□□□□□ -1.24
TMEM248-202ENST00000413593 KCNIP2Q9NS61 270 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 XCL2Q9UBD3 114 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 X6R8D5 127 aa7.32□□□□□ -1.24
TMEM248-202ENST00000413593 A8MTW9 85 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF705EA8MWA4 302 aaPredicted RBP7.31□□□□□ -1.24
TMEM248-202ENST00000413593 H3BQ15 152 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 H3BTX0 84 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 SLC17A3O00476 420 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 GIPP09681 153 aaPredicted RBP7.31□□□□□ -1.24
TMEM248-202ENST00000413593 HLA-DMBP28068 263 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 PSG9Q00887 426 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 PSG3Q16557 428 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 AMTNQ6UX39 209 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF709Q8N972 641 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 Q8NAQ8 132 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF738Q8NE65 137 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 ASB13Q8WXK3 278 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 SLC35B3Q9H1N7 401 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 HRH4Q9H3N8 390 aa7.31□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF331Q9NQX6 463 aaPredicted RBP7.31□□□□□ -1.24
TMEM248-202ENST00000413593 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 C17orf112F2Z3M2 114 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 DEFB4AO15263 64 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 DUSP14O95147 198 aaKnown RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 IFNA5P01569 189 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF705DP0CH99 300 aaPredicted RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF705BP0CI00 300 aaPredicted RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 MIFP14174 115 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 CNN1P51911 297 aaKnown RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 FXYD7P58549 80 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 GUK1Q16774 197 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 Q5BKY6 102 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 SAT2Q96F10 170 aaPredicted RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 PARD6GQ9BYG4 376 aaPredicted RBP7.3□□□□□ -1.24
TMEM248-202ENST00000413593 WFDC1Q9HC57 220 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 TMEM14CQ9P0S9 112 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 AGRNO00468 2067 aa7.3□□□□□ -1.24
TMEM248-202ENST00000413593 A6NJY4 79 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 RBMY1A1P0DJD3 496 aaKnown RBP7.29□□□□□ -1.24
TMEM248-202ENST00000413593 RBMY1CP0DJD4 496 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 HIST1H1AQ02539 215 aaPredicted RBP7.29□□□□□ -1.24
TMEM248-202ENST00000413593 PMS2P11Q13670 270 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 RBMY1FQ15415 496 aaKnown RBP7.29□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF705AQ6ZN79 300 aaPredicted RBP7.29□□□□□ -1.24
TMEM248-202ENST00000413593 MIR17HGQ75NE6 70 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 OR8A1Q8NGG7 326 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 SCGB1C1Q8TD33 95 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 RPUSD4Q96CM3 377 aaKnown RBP7.29□□□□□ -1.24
TMEM248-202ENST00000413593 MFFQ9GZY8 342 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF586Q9NXT0 402 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
TMEM248-202ENST00000413593 TRBV19A0A075B6N1 114 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 CXorf65A6NEN9 183 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF705FA8MVS1 300 aaPredicted RBP7.28□□□□□ -1.24
TMEM248-202ENST00000413593 ZNF253O75346 499 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 PYYP10082 97 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 PRB4P10163 310 aaPredicted RBP7.28□□□□□ -1.24
TMEM248-202ENST00000413593 HIST1H1EP10412 219 aaKnown RBP7.28□□□□□ -1.24
TMEM248-202ENST00000413593 OR2T35Q8NGX2 323 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 FAM167A-AS1Q96KT0 104 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 AQP10Q96PS8 301 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 SLC25A2Q9BXI2 301 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 MRPL32Q9BYC8 188 aaKnown RBP7.28□□□□□ -1.24
TMEM248-202ENST00000413593 FUT9Q9Y231 359 aa7.28□□□□□ -1.24
TMEM248-202ENST00000413593 M0R2Z0 102 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 NDUFB4O95168 129 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 AMBPP02760 352 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 PDE6HQ13956 83 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 SPINK13Q1W4C9 94 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 FFAR4Q5NUL3 377 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 C1orf158Q8N1D5 194 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 C11orf45Q8TAV5 145 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 IGF2BP2-AS1Q96M15 143 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 NEU1Q99519 415 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 DYNC2H1Q8NCM8 4307 aaKnown RBP7.27□□□□□ -1.25
TMEM248-202ENST00000413593 RYR3Q15413 4870 aa7.27□□□□□ -1.25
TMEM248-202ENST00000413593 IGHV3OR16-12A0A075B7B8 117 aa7.26□□□□□ -1.25
TMEM248-202ENST00000413593 RNF222A6NCQ9 220 aa7.26□□□□□ -1.25
TMEM248-202ENST00000413593 NUPR2A6NF83 97 aa7.26□□□□□ -1.25
TMEM248-202ENST00000413593 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms