RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PYYP10082 97 aa11.37□□□□□ -0.59
LSM5-207ENST00000410044 PDE6HQ13956 83 aa11.37□□□□□ -0.59
LSM5-207ENST00000410044 LCN15Q6UWW0 184 aa11.37□□□□□ -0.59
LSM5-207ENST00000410044 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
LSM5-207ENST00000410044 TRBV19A0A075B6N1 114 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 ISLRO14498 428 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 HMGB3O15347 200 aaKnown RBP11.36□□□□□ -0.59
LSM5-207ENST00000410044 EIF3GO75821 320 aaKnown RBP eCLIP11.36□□□□□ -0.59
LSM5-207ENST00000410044 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 WFDC3Q8IUB2 231 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 FAM213BQ8TBF2 198 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
LSM5-207ENST00000410044 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 CLEC5AQ9NY25 188 aa11.36□□□□□ -0.59
LSM5-207ENST00000410044 MAP1LC3B2A6NCE7 125 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 NDUFB4O95168 129 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 GCHFRP30047 84 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 ID1P41134 155 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 PSMB3P49720 205 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 Q8N1Y9 231 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 LYPD1Q8N2G4 141 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 ZNF680Q8NEM1 530 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 MAP1LC3BQ9GZQ8 125 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 TMEM167BQ9NRX6 74 aa11.35□□□□□ -0.59
LSM5-207ENST00000410044 TRAV8-2A0A0B4J237 113 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 OR10J4P0C629 311 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 TFPI2P48307 235 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 FAM74A1Q5RGS3 127 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 FAM24BQ8N5W8 94 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 C16orf92Q96LL3 132 aa11.34□□□□□ -0.59
LSM5-207ENST00000410044 IFNA7P01567 189 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 CD7P09564 240 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 SNRPD3P62318 126 aaKnown RBP11.33□□□□□ -0.6
LSM5-207ENST00000410044 UBE2L3P68036 154 aaKnown RBP11.33□□□□□ -0.6
LSM5-207ENST00000410044 BLOC1S1P78537 153 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 PSG9Q00887 426 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 PMS2P11Q13670 270 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 ODF3L2Q3SX64 289 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 SFT2D1Q8WV19 159 aa11.33□□□□□ -0.6
LSM5-207ENST00000410044 ZNF705EA8MWA4 302 aaPredicted RBP11.32□□□□□ -0.6
LSM5-207ENST00000410044 SLC17A3O00476 420 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 HBE1P02100 147 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 SNRPCP09234 159 aaKnown RBP11.32□□□□□ -0.6
LSM5-207ENST00000410044 FGF8P55075 233 aaPredicted RBP11.32□□□□□ -0.6
LSM5-207ENST00000410044 GTSCR1Q86UQ5 136 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 LYPD6BQ8NI32 183 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 MAP6D1Q9H9H5 199 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 PRELID1Q9Y255 219 aa11.32□□□□□ -0.6
LSM5-207ENST00000410044 MGAM2Q2M2H8 2515 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 TEX46H3BTG2 121 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 H3BTX0 84 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 ZNF688P0C7X2 276 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 CD81P60033 236 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 PSG3Q16557 428 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 ARL6IP6Q8N6S5 226 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
LSM5-207ENST00000410044 PRR25Q96S07 402 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 TMPRSS5Q9H3S3 457 aa11.31□□□□□ -0.6
LSM5-207ENST00000410044 A0A1W2PRE2 83 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 DEFB131AP59861 70 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
LSM5-207ENST00000410044 IFITM2Q01629 132 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 IGFL4Q6B9Z1 124 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 C20orf173Q96LM9 149 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 UBQLN2Q9UHD9 624 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 ARL2-SNX15V9GYD0 113 aa11.3□□□□□ -0.6
LSM5-207ENST00000410044 A8MZ25 164 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 PPT1P50897 306 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 CCL20P78556 96 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 PSMG4Q5JS54 123 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 LINC00052Q96N35 136 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 NKX6-2Q9C056 277 aaPredicted RBP11.29□□□□□ -0.6
LSM5-207ENST00000410044 Q9H3A6 140 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 AAMDCQ9H7C9 122 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 OTORQ9NRC9 128 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 AURKAIP1Q9NWT8 199 aaPredicted RBP11.29□□□□□ -0.6
LSM5-207ENST00000410044 DNAH3Q8TD57 4116 aa11.29□□□□□ -0.6
LSM5-207ENST00000410044 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
LSM5-207ENST00000410044 ICAM4Q14773 271 aa11.28□□□□□ -0.6
LSM5-207ENST00000410044 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
LSM5-207ENST00000410044 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
LSM5-207ENST00000410044 RNF182Q8N6D2 247 aa11.28□□□□□ -0.6
LSM5-207ENST00000410044 PGPA6NDG6 321 aa11.27□□□□□ -0.61
LSM5-207ENST00000410044 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
LSM5-207ENST00000410044 FOXI2Q6ZQN5 318 aa11.27□□□□□ -0.61
LSM5-207ENST00000410044 CLUHP3Q96NS8 147 aa11.27□□□□□ -0.61
LSM5-207ENST00000410044 CITED4Q96RK1 184 aa11.27□□□□□ -0.61
LSM5-207ENST00000410044 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
LSM5-207ENST00000410044 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
LSM5-207ENST00000410044 IQCF2Q8IXL9 164 aa11.26□□□□□ -0.61
LSM5-207ENST00000410044 DEFB125Q8N687 156 aa11.26□□□□□ -0.61
LSM5-207ENST00000410044 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
LSM5-207ENST00000410044 RPUSD4Q96CM3 377 aaKnown RBP11.26□□□□□ -0.61
LSM5-207ENST00000410044 AGRNO00468 2067 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms