RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZNF709Q8N972 641 aa22.69■■□□□ 1.22
TRAF3IP1-203ENST00000409739 CSNK1G2-AS1Q8NCQ2 148 aa22.69■■□□□ 1.22
TRAF3IP1-203ENST00000409739 OR4B1Q8NGF8 309 aa22.69■■□□□ 1.22
TRAF3IP1-203ENST00000409739 HLA-DMBP28068 263 aa22.68■■□□□ 1.22
TRAF3IP1-203ENST00000409739 Q5BKY6 102 aa22.68■■□□□ 1.22
TRAF3IP1-203ENST00000409739 FAM78BQ5VT40 261 aa22.68■■□□□ 1.22
TRAF3IP1-203ENST00000409739 WFDC1Q9HC57 220 aa22.68■■□□□ 1.22
TRAF3IP1-203ENST00000409739 ZNF738Q8NE65 137 aa22.67■■□□□ 1.22
TRAF3IP1-203ENST00000409739 LRRC20Q8TCA0 184 aa22.67■■□□□ 1.22
TRAF3IP1-203ENST00000409739 C1QTNF4Q9BXJ3 329 aa22.67■■□□□ 1.22
TRAF3IP1-203ENST00000409739 HRH4Q9H3N8 390 aa22.67■■□□□ 1.22
TRAF3IP1-203ENST00000409739 XCL2Q9UBD3 114 aa22.67■■□□□ 1.22
TRAF3IP1-203ENST00000409739 C17orf112F2Z3M2 114 aa22.66■■□□□ 1.22
TRAF3IP1-203ENST00000409739 IFNA5P01569 189 aa22.66■■□□□ 1.22
TRAF3IP1-203ENST00000409739 SLC50A1Q9BRV3 221 aa22.66■■□□□ 1.22
TRAF3IP1-203ENST00000409739 ZNF331Q9NQX6 463 aaPredicted RBP22.66■■□□□ 1.22
TRAF3IP1-203ENST00000409739 A8MTW9 85 aa22.65■■□□□ 1.22
TRAF3IP1-203ENST00000409739 H3BQ15 152 aa22.65■■□□□ 1.22
TRAF3IP1-203ENST00000409739 H3BTX0 84 aa22.65■■□□□ 1.22
TRAF3IP1-203ENST00000409739 SLC17A3O00476 420 aa22.65■■□□□ 1.22
TRAF3IP1-203ENST00000409739 PARD6GQ9BYG4 376 aaPredicted RBP22.65■■□□□ 1.22
TRAF3IP1-203ENST00000409739 FXYD7P58549 80 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 PSG3Q16557 428 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 IL17DQ8TAD2 202 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 SCGB1C1Q8TD33 95 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 AQP10Q96PS8 301 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 SLC35B3Q9H1N7 401 aa22.64■■□□□ 1.21
TRAF3IP1-203ENST00000409739 STARD9Q9P2P6 4700 aa22.63■■□□□ 1.21
TRAF3IP1-203ENST00000409739 ZNF705EA8MWA4 302 aaPredicted RBP22.63■■□□□ 1.21
TRAF3IP1-203ENST00000409739 PSG9Q00887 426 aa22.63■■□□□ 1.21
TRAF3IP1-203ENST00000409739 C11orf68Q9H3H3 251 aaKnown RBP22.63■■□□□ 1.21
TRAF3IP1-203ENST00000409739 CNN1P51911 297 aaKnown RBP22.62■■□□□ 1.21
TRAF3IP1-203ENST00000409739 SAT2Q96F10 170 aaPredicted RBP22.62■■□□□ 1.21
TRAF3IP1-203ENST00000409739 TMEM14CQ9P0S9 112 aa22.62■■□□□ 1.21
TRAF3IP1-203ENST00000409739 X6R8D5 127 aa22.62■■□□□ 1.21
TRAF3IP1-203ENST00000409739 ZNF705DP0CH99 300 aaPredicted RBP22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 ZNF705BP0CI00 300 aaPredicted RBP22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 GUK1Q16774 197 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 AMTNQ6UX39 209 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 MIR17HGQ75NE6 70 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 Q8NAQ8 132 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 SLC25A2Q9BXI2 301 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 ZNF586Q9NXT0 402 aa22.61■■□□□ 1.21
TRAF3IP1-203ENST00000409739 TENM2Q9NT68 2774 aa22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 DUSP14O95147 198 aaKnown RBP22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 FFAR4Q5NUL3 377 aa22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 OR2T35Q8NGX2 323 aa22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 MRPL32Q9BYC8 188 aaKnown RBP22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 MFFQ9GZY8 342 aa22.6■■□□□ 1.21
TRAF3IP1-203ENST00000409739 PYYP10082 97 aa22.59■■□□□ 1.21
TRAF3IP1-203ENST00000409739 RPUSD4Q96CM3 377 aaKnown RBP22.59■■□□□ 1.21
TRAF3IP1-203ENST00000409739 FAM167A-AS1Q96KT0 104 aa22.59■■□□□ 1.21
TRAF3IP1-203ENST00000409739 RFNGQ9Y644 331 aa22.59■■□□□ 1.21
TRAF3IP1-203ENST00000409739 G3V3Q6 166 aa22.58■■□□□ 1.21
TRAF3IP1-203ENST00000409739 DEFB4AO15263 64 aa22.58■■□□□ 1.21
TRAF3IP1-203ENST00000409739 PRB4P10163 310 aaPredicted RBP22.58■■□□□ 1.21
TRAF3IP1-203ENST00000409739 OR8A1Q8NGG7 326 aa22.58■■□□□ 1.21
TRAF3IP1-203ENST00000409739 FXYD6-FXYD2A0A087WZ82 144 aa22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 ZNF253O75346 499 aa22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 HIST1H1EP10412 219 aaKnown RBP22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 MIFP14174 115 aa22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 HIST1H1AQ02539 215 aaPredicted RBP22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 FUT9Q9Y231 359 aa22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 KMT2CQ8NEZ4 4911 aaKnown RBP22.57■■□□□ 1.2
TRAF3IP1-203ENST00000409739 TRBV19A0A075B6N1 114 aa22.56■■□□□ 1.2
TRAF3IP1-203ENST00000409739 IGHV4-28A0A0C4DH34 117 aa22.56■■□□□ 1.2
TRAF3IP1-203ENST00000409739 RNF222A6NCQ9 220 aa22.56■■□□□ 1.2
TRAF3IP1-203ENST00000409739 ZNF705FA8MVS1 300 aaPredicted RBP22.55■■□□□ 1.2
TRAF3IP1-203ENST00000409739 ZNF266Q14584 549 aa22.55■■□□□ 1.2
TRAF3IP1-203ENST00000409739 ZNF705AQ6ZN79 300 aaPredicted RBP22.55■■□□□ 1.2
TRAF3IP1-203ENST00000409739 TNFSF18Q9UNG2 199 aa22.55■■□□□ 1.2
TRAF3IP1-203ENST00000409739 RBMY1A1P0DJD3 496 aaKnown RBP22.54■■□□□ 1.2
TRAF3IP1-203ENST00000409739 RBMY1CP0DJD4 496 aa22.54■■□□□ 1.2
TRAF3IP1-203ENST00000409739 RBMY1FQ15415 496 aaKnown RBP22.54■■□□□ 1.2
TRAF3IP1-203ENST00000409739 INO80EQ8NBZ0 244 aaPredicted RBP22.54■■□□□ 1.2
TRAF3IP1-203ENST00000409739 TIMM9Q9Y5J7 89 aa22.54■■□□□ 1.2
TRAF3IP1-203ENST00000409739 NDUFB4O95168 129 aa22.53■■□□□ 1.2
TRAF3IP1-203ENST00000409739 PMS2P11Q13670 270 aa22.53■■□□□ 1.2
TRAF3IP1-203ENST00000409739 PDE6HQ13956 83 aa22.53■■□□□ 1.2
TRAF3IP1-203ENST00000409739 SPINK13Q1W4C9 94 aa22.52■■□□□ 1.2
TRAF3IP1-203ENST00000409739 BLNKQ8WV28 456 aa22.52■■□□□ 1.2
TRAF3IP1-203ENST00000409739 PRAC2D3DTV9 90 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 BOLA2-SMG1P6H3BVE0 249 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 M0R2Z0 102 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 RHOBP62745 196 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 PAXXQ9BUH6 204 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 OR51M1Q9H341 326 aa22.51■■□□□ 1.19
TRAF3IP1-203ENST00000409739 CXorf65A6NEN9 183 aa22.5■■□□□ 1.19
TRAF3IP1-203ENST00000409739 AMBPP02760 352 aa22.5■■□□□ 1.19
TRAF3IP1-203ENST00000409739 HSD17B11Q8NBQ5 300 aa22.5■■□□□ 1.19
TRAF3IP1-203ENST00000409739 FXYD5Q96DB9 178 aa22.5■■□□□ 1.19
TRAF3IP1-203ENST00000409739 IGHV3OR16-12A0A075B7B8 117 aa22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 ACOT6Q3I5F7 207 aaPredicted RBP22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 C1orf158Q8N1D5 194 aa22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 MRPL53Q96EL3 112 aaKnown RBP22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 ZNF503Q96F45 646 aa22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 IGF2BP2-AS1Q96M15 143 aa22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 NEU1Q99519 415 aa22.49■■□□□ 1.19
TRAF3IP1-203ENST00000409739 CRXO43186 299 aaPredicted RBP22.48■■□□□ 1.19
TRAF3IP1-203ENST00000409739 OR7C2O60412 319 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms