RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 AURKAIP1Q9NWT8 199 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-204ENST00000409727 RNF24Q9Y225 148 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 NDUFA7O95182 113 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 MYCNOSP40205 109 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 RPL35P42766 123 aaKnown RBP9.51□□□□□ -0.89
CHMP3-204ENST00000409727 GALR1P47211 349 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 WIPF2Q8TF74 440 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-204ENST00000409727 TVP23CQ96ET8 276 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 SGK494Q96LW2 274 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-204ENST00000409727 U3KQE9 123 aa9.51□□□□□ -0.89
CHMP3-204ENST00000409727 IGKV3-7A0A075B6H7 116 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 TRAV34A0A0B4J273 112 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 RPL11P62913 178 aaKnown RBP9.5□□□□□ -0.89
CHMP3-204ENST00000409727 ADIRFQ15847 76 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 C1orf194Q5T5A4 169 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 SIGLEC15Q6ZMC9 328 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 DPF1Q92782 380 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 RHPN1-AS1Q9BWJ2 59 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 RPS10P5Q9NQ39 176 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 OTORQ9NRC9 128 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
CHMP3-204ENST00000409727 IGHV7-4-1A0A0J9YVY3 117 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 HELTA6NFD8 242 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 PEX7O00628 323 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 BTN1A1Q13410 526 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 C16orf54Q6UWD8 224 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 CMTM2Q8TAZ6 248 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 UFC1Q9Y3C8 167 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 TRBV20OR9-2A0A075B6H5 130 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 LINC01619G3V211 115 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 M0R3E3 92 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 NDUFS6O75380 124 aaKnown RBP9.49□□□□□ -0.89
CHMP3-204ENST00000409727 FAM74A3Q4VXF1 159 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 TMEM88Q6PEY1 159 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-204ENST00000409727 C5orf17Q8NAS9 161 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 C2CD4CQ8TF44 421 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 GRAMD2BQ96HH9 432 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 GPR82Q96P67 336 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 SDF2L1Q9HCN8 221 aa9.49□□□□□ -0.89
CHMP3-204ENST00000409727 A0A1W2PS18 150 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 TMEM213A2RRL7 107 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 C7orf77A4D0Y5 90 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 CHEK1O14757 476 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 HLA-DMBP28068 263 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 PROK1P58294 105 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 RNF182Q8N6D2 247 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 SMPXQ9UHP9 88 aa9.48□□□□□ -0.89
CHMP3-204ENST00000409727 GNG4P50150 75 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 CNN1P51911 297 aaKnown RBP9.47□□□□□ -0.89
CHMP3-204ENST00000409727 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
CHMP3-204ENST00000409727 PSG9Q00887 426 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 PDE6HQ13956 83 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 CENPWQ5EE01 88 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 GOLT1AQ6ZVE7 132 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 C1QL4Q86Z23 238 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 CBLN2Q8IUK8 224 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 NHLRC2Q8NBF2 726 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 TSSC4Q9Y5U2 329 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-204ENST00000409727 K7EMT4 169 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 ISLRO14498 428 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 TCRAP04437 139 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 KLF5Q13887 457 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-204ENST00000409727 LYPD1Q8N2G4 141 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 HIST1H2BAQ96A08 127 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 ATG101Q9BSB4 218 aa9.47□□□□□ -0.89
CHMP3-204ENST00000409727 ZNF331Q9NQX6 463 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-204ENST00000409727 SETD2Q9BYW2 2564 aaPredicted RBP9.46□□□□□ -0.89
CHMP3-204ENST00000409727 A0A087X0K7 114 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 TRAV8-1A0A0A6YYK1 113 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 ZNF705FA8MVS1 300 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-204ENST00000409727 LGALS9O00182 355 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 UBE2G1P62253 170 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 PNRC1Q12796 327 aaPredicted RBP9.46□□□□□ -0.9
CHMP3-204ENST00000409727 NSUN5P1Q3KNT7 163 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 LINC01551Q86U37 167 aa9.46□□□□□ -0.9
CHMP3-204ENST00000409727 KRTAP10-3P60369 221 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 RHEBQ15382 184 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 OCC1Q8TAD7 63 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 DLX4Q92988 240 aaPredicted RBP9.45□□□□□ -0.9
CHMP3-204ENST00000409727 C16orf92Q96LL3 132 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 ASCL2Q99929 193 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 TCEAL7Q9BRU2 100 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 C2orf70A6NJV1 201 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 A8MWP6 167 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 TSPAN4O14817 238 aa9.45□□□□□ -0.9
CHMP3-204ENST00000409727 MGST1P10620 155 aaKnown RBP9.45□□□□□ -0.9
CHMP3-204ENST00000409727 CBLN1P23435 193 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms