RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 HELTA6NFD8 242 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 SLC17A3O00476 420 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 TSPAN4O14817 238 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 CD7P09564 240 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 S100A7AQ86SG5 101 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 PAXXQ9BUH6 204 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 WFDC10AQ9H1F0 79 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 OR51M1Q9H341 326 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 TMPRSS5Q9H3S3 457 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 ZNF586Q9NXT0 402 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 CD5P06127 495 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 S100A7P31151 101 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 DEFB1P60022 68 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 UBE2L3P68036 154 aaKnown RBP10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 RNF182Q8N6D2 247 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 HRH4Q9H3N8 390 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
CHRNA1-204ENST00000409323 CTXND1A0A1B0GTU2 59 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 H2AFB1P0C5Y9 115 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 ZNF688P0C7X2 276 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 TAS2R45P59539 299 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 ZNF124Q15973 351 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 DCANP1Q8TF63 244 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 FXYD5Q96DB9 178 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 MAP1LC3BQ9GZQ8 125 aa10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 ZNF256Q9Y2P7 627 aaPredicted RBP10.55□□□□□ -0.72
CHRNA1-204ENST00000409323 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 WIPF1O43516 503 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 STAG3L2P0CL84 134 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 STAG3L3P0CL85 134 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 PAFAH1B2P68402 229 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 SFT2D1Q8WV19 159 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 LINC00052Q96N35 136 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 GPR82Q96P67 336 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 SPAG8Q99932 426 aaPredicted RBP10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 SMDT1Q9H4I9 107 aa10.54□□□□□ -0.72
CHRNA1-204ENST00000409323 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 K7EQG2 157 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 GCHFRP30047 84 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 CD81P60033 236 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 C16orf92Q96LL3 132 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 C20orf173Q96LM9 149 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 GPR61Q9BZJ8 451 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
CHRNA1-204ENST00000409323 TRAV8-2A0A0B4J237 113 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 SOCS3O14543 225 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 HBE1P02100 147 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 PSMG4Q5JS54 123 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.72
CHRNA1-204ENST00000409323 NOTCH1P46531 2555 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 AGRNO00468 2067 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 TRBV19A0A075B6N1 114 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 OR4C46A6NHA9 309 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 NDUFB4O95168 129 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 CXorf1O96002 111 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 DEFB131AP59861 70 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 UBE2G2P60604 165 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 RANP62826 216 aaKnown RBP10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 CCL20P78556 96 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 ODF3L2Q3SX64 289 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 C10orf91Q5T1B1 145 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 PQLC2Q6ZP29 291 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 RNF24Q9Y225 148 aa10.52□□□□□ -0.73
CHRNA1-204ENST00000409323 A0A087X0K7 114 aa10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF705FA8MVS1 300 aaPredicted RBP10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 NDUFS6O75380 124 aaKnown RBP10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 SRSF3P84103 164 aaKnown RBP10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 MAP6D1Q9H9H5 199 aa10.51□□□□□ -0.73
CHRNA1-204ENST00000409323 TMEM218A2RU14 115 aa10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 F6UB75 175 aa10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 GTSCR1Q86UQ5 136 aa10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 DEFB125Q8N687 156 aa10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF331Q9NQX6 463 aaPredicted RBP10.5□□□□□ -0.73
CHRNA1-204ENST00000409323 KNCNA6PVL3 124 aa10.49□□□□□ -0.73
CHRNA1-204ENST00000409323 M0R3E3 92 aa10.49□□□□□ -0.73
CHRNA1-204ENST00000409323 ICAM4Q14773 271 aa10.49□□□□□ -0.73
CHRNA1-204ENST00000409323 RPH3ALQ9UNE2 315 aa10.49□□□□□ -0.73
CHRNA1-204ENST00000409323 MEOX2P50222 304 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 SNRPD3P62318 126 aaKnown RBP10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 GUK1Q16774 197 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 GDF5OSQ5U4N7 250 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 Q8N1Y9 231 aa10.48□□□□□ -0.73
CHRNA1-204ENST00000409323 ZNF738Q8NE65 137 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms